RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 LRSAM1Q6UWE0 723 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 CUL5Q93034 780 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 AMNQ9BXJ7 453 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 RIC8AQ9NPQ8 531 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 PCDHB6Q9Y5E3 794 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 KINO60870 393 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 PTPREP23469 700 aa17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 EARS2Q5JPH6 523 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 AXDND1Q5T1B0 1012 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 FBXO11Q86XK2 927 aa17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 COA7Q96BR5 231 aa17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 WRNIP1Q96S55 665 aa17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 SRPRBQ9Y5M8 271 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
TRAPPC9-205ENST00000518839 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 SYCE3A1L190 88 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 FSD2A1L4K1 749 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 FAM205CA6NFA0 338 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 INPP5BP32019 993 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 EPHX2P34913 555 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 FAM83BQ5T0W9 1011 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 SPICE1Q8N0Z3 855 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 KLRG1Q96E93 195 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 TNMDQ9H2S6 317 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 PRR12Q9ULL5 1215 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 PCDHA1Q9Y5I3 950 aa17.19■□□□□ 0.34
TRAPPC9-205ENST00000518839 LAD1O00515 517 aa17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 PPP1R11O60927 126 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 NR1I2O75469 434 aa17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 ATP2C1P98194 919 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 RESP18Q5W5W9 173 aa17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 ENGASEQ8NFI3 743 aa17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 SSC5DA1L4H1 1573 aa17.18■□□□□ 0.34
TRAPPC9-205ENST00000518839 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 PPP1R12BO60237 982 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 NF2P35240 595 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 ZNF174Q15697 407 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 ZYXQ15942 572 aaKnown RBP17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 KIAA1755Q5JYT7 1200 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 ARL6IP4Q66PJ3 421 aaKnown RBP17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 PNMA8AQ86V59 439 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 FMR1NBQ8N0W7 255 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 NAP1L4Q99733 375 aaKnown RBP17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 RANBP17Q9H2T7 1088 aaKnown RBP17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 GOLPH3LQ9H4A5 285 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 PNMA2Q9UL42 364 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
TRAPPC9-205ENST00000518839 FDX1P10109 184 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 PTPRAP18433 802 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 CLK2P49760 499 aaKnown RBP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 MRE11P49959 708 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 SNW1Q13573 536 aaKnown RBP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 INF2Q27J81 1249 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 NOM1Q5C9Z4 860 aaKnown RBP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 NEK8Q86SG6 692 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 ZNF280CQ8ND82 737 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 TIGD1Q96MW7 591 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 BIN2Q9UBW5 565 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 HPSEQ9Y251 543 aa17.16■□□□□ 0.34
TRAPPC9-205ENST00000518839 A0A1B0GVL5 298 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 ADAMTS3O15072 1205 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 PFKFB1P16118 471 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 MCM7P33993 719 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 SYKP43405 635 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 IREB2P48200 963 aaKnown RBP17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 NDUFA8P51970 172 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 BACE1P56817 501 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 MAP3K9P80192 1104 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 PTGDRQ13258 359 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 PRAMEF18Q5VWM3 479 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 JAKMIP3Q5VZ66 844 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 C12orf42Q96LP6 360 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 OTOFQ9HC10 1997 aa17.15■□□□□ 0.34
TRAPPC9-205ENST00000518839 PARP14Q460N5 1801 aa17.14■□□□□ 0.34
TRAPPC9-205ENST00000518839 USP2O75604 605 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 FOSP01100 380 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC9-205ENST00000518839 DEKP35659 375 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms