RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 HDAC8Q9BY41 377 aa7□□□□□ -1.29
PCM1-205ENST00000517836 CGGBP1Q9UFW8 167 aaPredicted RBP7□□□□□ -1.29
PCM1-205ENST00000517836 EMC9Q9Y3B6 208 aa7□□□□□ -1.29
PCM1-205ENST00000517836 A0A1W2PQU0 124 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 ENPP3O14638 875 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 GSNP06396 782 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 ITGAVP06756 1048 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 ZNF227Q86WZ6 799 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 TRIM59Q8IWR1 403 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 ZBTB38Q8NAP3 1195 aaPredicted RBP6.99□□□□□ -1.29
PCM1-205ENST00000517836 ADCY4Q8NFM4 1077 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 BRF1Q92994 677 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 MRGPRX3Q96LB0 322 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 SLC26A8Q96RN1 970 aa6.99□□□□□ -1.29
PCM1-205ENST00000517836 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
PCM1-205ENST00000517836 NOL6Q9H6R4 1146 aaKnown RBP6.99□□□□□ -1.29
PCM1-205ENST00000517836 SHISA3A0PJX4 238 aa6.98□□□□□ -1.29
PCM1-205ENST00000517836 PPP2R2AP63151 447 aa6.98□□□□□ -1.29
PCM1-205ENST00000517836 CDKAL1Q5VV42 579 aa6.98□□□□□ -1.29
PCM1-205ENST00000517836 CWF19L1Q69YN2 538 aaKnown RBP6.98□□□□□ -1.29
PCM1-205ENST00000517836 TSPYL5Q86VY4 417 aaPredicted RBP6.98□□□□□ -1.29
PCM1-205ENST00000517836 NLGN1Q8N2Q7 840 aa6.98□□□□□ -1.29
PCM1-205ENST00000517836 ZSWIM2Q8NEG5 633 aa6.98□□□□□ -1.29
PCM1-205ENST00000517836 HSPA12BQ96MM6 686 aa6.98□□□□□ -1.29
PCM1-205ENST00000517836 AARSD1Q9BTE6 412 aaKnown RBP6.98□□□□□ -1.29
PCM1-205ENST00000517836 TMEM260Q9NX78 707 aa6.98□□□□□ -1.29
PCM1-205ENST00000517836 TRAV20A0A0B4J274 112 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 CCDC163A0A0D9SF12 145 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 H3BS24 57 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 ADCY3O60266 1144 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 CLSTN1O94985 981 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 C8AP07357 584 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 HSD3B2P26439 372 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 TPP2P29144 1249 aaPredicted RBP6.97□□□□□ -1.29
PCM1-205ENST00000517836 AMPD2Q01433 879 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 POU4F1Q01851 419 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 TMEM67Q5HYA8 995 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
PCM1-205ENST00000517836 TMPRSS7Q7RTY8 843 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 HOMER1Q86YM7 354 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 APPBP2Q92624 585 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 CCDC140Q96MF4 163 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 SEMA3GQ9NS98 782 aa6.97□□□□□ -1.29
PCM1-205ENST00000517836 KCNH1O95259 989 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 FAM153BP0C7A2 387 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 IKZF1Q13422 519 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 PPP2R5DQ14738 602 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 SYNPOQ8N3V7 929 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 POU5F2Q8N7G0 328 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 ASB11Q8WXH4 323 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 TCTN2Q96GX1 697 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 ZDHHC15Q96MV8 337 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 IPO9Q96P70 1041 aaKnown RBP6.96□□□□□ -1.3
PCM1-205ENST00000517836 ARHGEF4Q9NR80 690 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 ZSWIM5Q9P217 1185 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 PTCH2Q9Y6C5 1203 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 PITPNM2Q9BZ72 1349 aa6.96□□□□□ -1.3
PCM1-205ENST00000517836 H0Y8X5 98 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 MEIS1O00470 390 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 CDC45O75419 566 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 CAPNS1P04632 268 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 FGFR1P11362 822 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 ENDOUP21128 410 aaKnown RBP6.95□□□□□ -1.3
PCM1-205ENST00000517836 HOXC12P31275 282 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 BMP8BP34820 402 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 CTSKP43235 329 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 NOP2P46087 812 aaKnown RBP6.95□□□□□ -1.3
PCM1-205ENST00000517836 SQSTM1Q13501 440 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 GAB4Q2WGN9 574 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 ANGEL2Q5VTE6 544 aaKnown RBP6.95□□□□□ -1.3
PCM1-205ENST00000517836 GTF2IRD2BQ6EKJ0 949 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 ATG4DQ86TL0 474 aaPredicted RBP6.95□□□□□ -1.3
PCM1-205ENST00000517836 GTF2IRD2Q86UP8 949 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 FAM177A1Q8N128 213 aaPredicted RBP6.95□□□□□ -1.3
PCM1-205ENST00000517836 FAM168AQ92567 244 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 UBE2FQ969M7 185 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 CDC6Q99741 560 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 FANCLQ9NW38 375 aa6.95□□□□□ -1.3
PCM1-205ENST00000517836 SSU72P8A0A1W2PR75 194 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 ESYT3A0FGR9 886 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 BIN1O00499 593 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
PCM1-205ENST00000517836 ZP2Q05996 745 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 ZNF124Q15973 351 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 CRTC3Q6UUV7 619 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 SCUBE1Q8IWY4 988 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 LINC00116Q8NCU8 138 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 BTN2A2Q8WVV5 523 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 NKX2-4Q9H2Z4 354 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 KANSL2Q9H9L4 492 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 CYP26B1Q9NR63 512 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 DUSP13Q9UII6 198 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 MINPP1Q9UNW1 487 aa6.94□□□□□ -1.3
PCM1-205ENST00000517836 TBX1O43435 398 aa6.93□□□□□ -1.3
PCM1-205ENST00000517836 CPP00450 1065 aa6.93□□□□□ -1.3
PCM1-205ENST00000517836 LTKP29376 864 aa6.93□□□□□ -1.3
PCM1-205ENST00000517836 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
PCM1-205ENST00000517836 SLC23A3Q6PIS1 610 aa6.93□□□□□ -1.3
PCM1-205ENST00000517836 RNF111Q6ZNA4 994 aa6.93□□□□□ -1.3
PCM1-205ENST00000517836 USHBP1Q8N6Y0 703 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms