RNA–Protein interactions for RNA: ENST00000517744.1

IGKV1-35-201, Transcript of immunoglobulin kappa variable 1-35 (pseudogene), humanhuman

BASIC

Gene IGKV1-35, Length 285 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-35-201ENST00000517744 R3HDMLQ9H3Y0 253 aa12.62□□□□□ -0.39
IGKV1-35-201ENST00000517744 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
IGKV1-35-201ENST00000517744 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
IGKV1-35-201ENST00000517744 CTDP1Q9Y5B0 961 aaPredicted RBP12.62□□□□□ -0.39
IGKV1-35-201ENST00000517744 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
IGKV1-35-201ENST00000517744 PNMA6FA0A0J9YX94 578 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 GPR25O00155 361 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 LARGE1O95461 756 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 SLC25A27O95847 323 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 STAT3P40763 770 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 CCT2P78371 535 aaKnown RBP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 CDC37Q16543 378 aaPredicted RBP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 Q3C1V9 767 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 TKFCQ3LXA3 575 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 ANKRD13CQ8N6S4 541 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 RRP36Q96EU6 259 aaKnown RBP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 RNF26Q9BY78 433 aaPredicted RBP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 NCOA5Q9HCD5 579 aaKnown RBP12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 PCNTO95613 3336 aa12.61□□□□□ -0.39
IGKV1-35-201ENST00000517744 CPLX1O14810 134 aa12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 PRPF3O43395 683 aaKnown RBP12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 CDKL5O76039 1030 aa12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 SP3Q02447 781 aa12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 STK3Q13188 491 aa12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 PIGSQ96S52 555 aa12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 LLPHQ9BRT6 129 aaKnown RBP12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 MOV10L1Q9BXT6 1211 aaKnown RBP12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 MROH8Q9H579 483 aa12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 RAVER2Q9HCJ3 691 aaKnown RBP12.6□□□□□ -0.39
IGKV1-35-201ENST00000517744 hCG_1984214I3L0E3 225 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 FKTNO75072 461 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 MAPK4P31152 587 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 LACTBP83111 547 aaPredicted RBP12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 ST3GAL1Q11201 340 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 SNRNP48Q6IEG0 339 aaKnown RBP12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 CMTR1Q8N1G2 835 aaKnown RBP12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 CHST13Q8NET6 341 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 TMX3Q96JJ7 454 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 AMNQ9BXJ7 453 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 FBXO40Q9UH90 709 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
IGKV1-35-201ENST00000517744 FOXN1O15353 648 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 PPP1R11O60927 126 aaPredicted RBP12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 GNRH1P01148 92 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 CTCFP49711 727 aaPredicted RBP12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 SNAP25P60880 206 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 PLS1Q14651 629 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 CCDC174Q6PII3 467 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 TEX2Q8IWB9 1127 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 ABRAQ8N0Z2 381 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 CPXCR1Q8N123 301 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 NECAB1Q8N987 351 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 RGS22Q8NE09 1264 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 ERO1AQ96HE7 468 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 AGBL1Q96MI9 1066 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 PORCNQ9H237 461 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 ABCB11O95342 1321 aa12.58□□□□□ -0.4
IGKV1-35-201ENST00000517744 MYH6P13533 1939 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 STRNO43815 780 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 PEX10O60683 326 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 HSPA8P11142 646 aaKnown RBP12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 ERCC3P19447 782 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 GHRHRQ02643 423 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 SSRP1Q08945 709 aaKnown RBP12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 CUL4AQ13619 759 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 KIF22Q14807 665 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 ARHGEF6Q15052 776 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 PKN1Q16512 942 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 PFKFB3Q16875 520 aaPredicted RBP12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 SAMD3Q8N6K7 520 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 NSUN7Q8NE18 718 aaKnown RBP12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 ZNF296Q8WUU4 475 aaPredicted RBP12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 RIPK3Q9Y572 518 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 ZNF236Q9UL36 1845 aa12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
IGKV1-35-201ENST00000517744 MGAMO43451 1857 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms