RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 REPS2Q8NFH8 660 aa12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 FEM1BQ9UK73 627 aa12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 ZNF214Q9UL59 606 aaPredicted RBP12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 A0A0D9SFI3 127 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 TSPY2A6NKD2 308 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 ORC4O43929 436 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 FGAP02671 866 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 SDSP20132 328 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 CNGA1P29973 690 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 NMIQ13287 307 aaPredicted RBP12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 KCTD2Q14681 263 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 MMP19Q99542 508 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 TEX13BQ9BXU2 312 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 INCENPQ9NQS7 918 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 CTDP1Q9Y5B0 961 aaPredicted RBP12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 NCOR1O75376 2440 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 MYH7P12883 1935 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 PLIN4Q96Q06 1357 aa12.52□□□□□ -0.41
PDGFRB-203ENST00000517660 ATP2A1O14983 1001 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 FGRP09769 529 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 HSPD1P10809 573 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 BMP3P12645 472 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 CYBAP13498 195 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 KCNQ1P51787 676 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 MAML3Q96JK9 1138 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 PBX4Q9BYU1 374 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 CXXC1Q9P0U4 656 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 WDFY4Q6ZS81 3184 aa12.51□□□□□ -0.41
PDGFRB-203ENST00000517660 FAM86C2PA6NEL3 165 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 FDX1P10109 184 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 TLE2Q04725 743 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 ZNF792Q3KQV3 632 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 C1orf53Q5VUE5 145 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 ANO1Q5XXA6 986 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 SNRNP48Q6IEG0 339 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 CHURC1Q8WUH1 139 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 SLC38A10Q9HBR0 1119 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 IL17RBQ9NRM6 502 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 NRBP1Q9UHY1 535 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 STX8Q9UNK0 236 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 TACC3Q9Y6A5 838 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 TCF20Q9UGU0 1960 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-203ENST00000517660 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 TMEM232C9JQI7 657 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 HIP1O00291 1037 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 PGK2P07205 417 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 MCCP23508 829 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 SLC1A4P43007 532 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 NOVP48745 357 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 MRE11P49959 708 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 OAZ1P54368 228 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 RCSD1Q6JBY9 416 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 C16orf59Q7L2K0 433 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 FAM160B2Q86V87 743 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 CPXCR1Q8N123 301 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 RAVER2Q9HCJ3 691 aaKnown RBP12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 ISY1Q9ULR0 285 aaKnown RBP12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 RIPK3Q9Y572 518 aa12.49□□□□□ -0.41
PDGFRB-203ENST00000517660 MUC6Q6W4X9 2439 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 SEPT4O43236 478 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 NMT2O60551 498 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 PLA2G6O60733 806 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 GPR37L1O60883 481 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 PCP11498 1178 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 RASIP1Q5U651 963 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 ARRDC4Q8NCT1 418 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 CHST13Q8NET6 341 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 FERMT2Q96AC1 680 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 TINF2Q9BSI4 451 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 FBXO40Q9UH90 709 aa12.48□□□□□ -0.41
PDGFRB-203ENST00000517660 STAT2P52630 851 aa12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 HAND2P61296 217 aa12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 FPGSQ05932 587 aa12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 IKQ13123 557 aaPredicted RBP12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms