RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 PLA2G4DQ86XP0 818 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 DHX58Q96C10 678 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 ZBED3Q96IU2 234 aaPredicted RBP17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 SLFN14P0C7P3 912 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 SLC1A4P43007 532 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 SARM1Q6SZW1 724 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 GMCL1P1Q8NEA9 526 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 RAD21O60216 631 aa17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 LONP1P36776 959 aaKnown RBP17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 ADCY7P51828 1080 aa17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 NT5DC1Q5TFE4 455 aa17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 GRAMD1CQ8IYS0 662 aa17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 TRIM5Q9C035 493 aa17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 VEZTQ9HBM0 779 aa17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
THUMPD3-210ENST00000515662 F5H6K3 240 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 ZBTB5O15062 677 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 MSNP26038 577 aaKnown RBP17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 KLRC3Q07444 240 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 TMEM60Q9H2L4 133 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 TMEM260Q9NX78 707 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 ZKSCAN5Q9Y2L8 839 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 LAD1O00515 517 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 SARSP49591 514 aaKnown RBP17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 JAKMIP3Q5VZ66 844 aa17.55■□□□□ 0.4
THUMPD3-210ENST00000515662 TNIP1Q15025 636 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 SH3RF1Q7Z6J0 888 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 NEK8Q86SG6 692 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 GMCL1Q96IK5 515 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 RIC8AQ9NPQ8 531 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 MAN1B1Q9UKM7 699 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 NDUFB10O96000 172 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 BMP6P22004 513 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 LETM2Q2VYF4 491 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 DTHD1Q6ZMT9 781 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 TBCKQ8TEA7 893 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 SMARCE1Q969G3 411 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 PAGE5Q96GU1 130 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 CCDC34Q96HJ3 373 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 TMEM39BQ9GZU3 492 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
THUMPD3-210ENST00000515662 ARFGEF1Q9Y6D6 1849 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 WNT10BO00744 389 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 MYO1BO43795 1136 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 PRPHP41219 470 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 NCAPHQ15003 741 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 E2F4Q16254 413 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 NBPF9Q3BBW0 867 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 MYOZ2Q9NPC6 264 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 SYNPO2Q9UMS6 1093 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 SHTN1A0MZ66 631 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 CDAN1Q8IWY9 1227 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 IQUBQ8NA54 791 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 SPC24Q8NBT2 197 aa17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 PYM1Q9BRP8 204 aaKnown RBP17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
THUMPD3-210ENST00000515662 A0A1W2PRG0 241 aa17.52■□□□□ 0.4
THUMPD3-210ENST00000515662 SMTNL1A8MU46 457 aa17.52■□□□□ 0.4
THUMPD3-210ENST00000515662 IKBKBO14920 756 aa17.52■□□□□ 0.4
THUMPD3-210ENST00000515662 TBC1D12O60347 775 aa17.52■□□□□ 0.4
THUMPD3-210ENST00000515662 QRICH1Q2TAL8 776 aa17.52■□□□□ 0.4
THUMPD3-210ENST00000515662 NUP88Q99567 741 aaPredicted RBP17.52■□□□□ 0.4
THUMPD3-210ENST00000515662 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 SMC2O95347 1197 aa17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 PTGER2P43116 358 aa17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 ZNF280AP59817 542 aaPredicted RBP17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 MORC3Q14149 939 aa17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 TRIML1Q8N9V2 468 aa17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.39
THUMPD3-210ENST00000515662 NEMFO60524 1076 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 CDC25BP30305 580 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 AFMP43652 599 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 CLK2P49760 499 aaKnown RBP17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 MMP14P50281 582 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 CDC37Q16543 378 aaPredicted RBP17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 PDXDC2PQ6P474 469 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 CUL5Q93034 780 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 MRFAP1L1Q96HT8 127 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 GOLGA6L6A8MZA4 724 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 OR52Z1P0C646 297 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 RPS12P25398 132 aaKnown RBP17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 TXLNAP40222 546 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 MRPL12P52815 198 aaKnown RBP17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
THUMPD3-210ENST00000515662 BMP3P12645 472 aa17.5■□□□□ 0.39
THUMPD3-210ENST00000515662 CDC25AP30304 524 aa17.5■□□□□ 0.39
THUMPD3-210ENST00000515662 DPYDQ12882 1025 aa17.5■□□□□ 0.39
THUMPD3-210ENST00000515662 UBE2SQ16763 222 aa17.5■□□□□ 0.39
THUMPD3-210ENST00000515662 ZNF830Q96NB3 372 aaPredicted RBP17.5■□□□□ 0.39
THUMPD3-210ENST00000515662 PSTPIP2Q9H939 334 aa17.5■□□□□ 0.39
THUMPD3-210ENST00000515662 ARHGEF10LQ9HCE6 1279 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms