RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 LACRTQ9GZZ8 138 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 EBF2Q9HAK2 575 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 PCDHB6Q9Y5E3 794 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 ABCC12Q96J65 1359 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 MAFGO15525 162 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 COQ9O75208 318 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 LIFRP42702 1097 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 DNM2P50570 870 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 RWDD2BP57060 319 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 MTA1Q13330 715 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 NELFBQ8WX92 580 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 OSBPL7Q9BZF2 842 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
SMAD1-215ENST00000515385 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 MYO5AQ9Y4I1 1855 aaKnown RBP14.24□□□□□ -0.13
SMAD1-215ENST00000515385 NUTM2BA6NNL0 878 aaPredicted RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 NUTM2EB1AL46 878 aaPredicted RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 DNM1LO00429 736 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 LIN7AO14910 233 aaPredicted RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 TRAPPC3O43617 180 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 PARP1P09874 1014 aaKnown RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 ZBED6P86452 979 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 BIRC3Q13489 604 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 ZNF658Q5TYW1 1059 aaPredicted RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 NFXL1Q6ZNB6 911 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 MICU3Q86XE3 530 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 ZNF507Q8TCN5 953 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 NOC3LQ8WTT2 800 aaKnown RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 IP6K1Q92551 441 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 CUL5Q93034 780 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 SAAL1Q96ER3 474 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 TMBIM4Q9HC24 238 aa14.23□□□□□ -0.13
SMAD1-215ENST00000515385 FAM217BQ9NTX9 383 aaPredicted RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 PDS5AQ29RF7 1337 aaKnown RBP14.23□□□□□ -0.13
SMAD1-215ENST00000515385 TRIM75PA6NK02 468 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 ATP6V1G2O95670 118 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 GSTA1P08263 222 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 PAEPP09466 180 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 SLC7A5Q01650 507 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 TRAF1Q13077 416 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 RBBP5Q15291 538 aaKnown RBP14.22□□□□□ -0.13
SMAD1-215ENST00000515385 E2F5Q15329 346 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 CDCA2Q69YH5 1023 aaPredicted RBP14.22□□□□□ -0.13
SMAD1-215ENST00000515385 MPRIPQ6WCQ1 1025 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 SMYD4Q8IYR2 804 aaPredicted RBP14.22□□□□□ -0.13
SMAD1-215ENST00000515385 SEC16BQ96JE7 1060 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 PARP4Q9UKK3 1724 aaKnown RBP14.22□□□□□ -0.13
SMAD1-215ENST00000515385 DIP2BQ9P265 1576 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 SLIT3O75094 1523 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 RCCD1A6NED2 376 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 GTPBP6O43824 516 aaPredicted RBP14.22□□□□□ -0.13
SMAD1-215ENST00000515385 USP49Q70CQ1 688 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 XAGE3Q8WTP9 111 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 PIK3R5Q8WYR1 880 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 THAP9Q9H5L6 903 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 SH2D4AQ9H788 454 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 NOD2Q9HC29 1040 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 PLCB1Q9NQ66 1216 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 RIPOR2Q9Y4F9 1068 aa14.22□□□□□ -0.13
SMAD1-215ENST00000515385 A0A1W2PQJ5 194 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 MACROD2A1Z1Q3 448 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 BUB1BO60566 1050 aaPredicted RBP14.21□□□□□ -0.13
SMAD1-215ENST00000515385 DEXIO95424 95 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 HSPA9P38646 679 aaKnown RBP14.21□□□□□ -0.13
SMAD1-215ENST00000515385 ELF3P78545 371 aaPredicted RBP14.21□□□□□ -0.13
SMAD1-215ENST00000515385 CDC37Q16543 378 aaPredicted RBP14.21□□□□□ -0.13
SMAD1-215ENST00000515385 CFAP221Q4G0U5 840 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 FIGNQ5HY92 759 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 GKAP1Q5VSY0 366 aaPredicted RBP14.21□□□□□ -0.13
SMAD1-215ENST00000515385 RUFY4Q6ZNE9 571 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 ANKRD13DQ6ZTN6 518 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 CYB5R4Q7L1T6 521 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 ANKRD23Q86SG2 305 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 IGDCC4Q8TDY8 1250 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 PPANQ9NQ55 473 aaKnown RBP14.21□□□□□ -0.13
SMAD1-215ENST00000515385 MAGEC2Q9UBF1 373 aaPredicted RBP14.21□□□□□ -0.13
SMAD1-215ENST00000515385 SWAP70Q9UH65 585 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 SLC12A7Q9Y666 1083 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 ECM29Q5VYK3 1845 aa14.21□□□□□ -0.13
SMAD1-215ENST00000515385 A0A087X0B3 334 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 CFAP73A6NFT4 308 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 GCOM1H8Y6P7 765 aaPredicted RBP14.21□□□□□ -0.14
SMAD1-215ENST00000515385 CIAO1O76071 339 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 SSBP05455 408 aaKnown RBP eCLIP14.21□□□□□ -0.14
SMAD1-215ENST00000515385 MYZAPP0CAP1 466 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 SRGNP10124 158 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 TIMM10P62072 90 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 LMBR1Q8WVP7 490 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 SYMPKQ92797 1274 aaKnown RBP14.21□□□□□ -0.14
SMAD1-215ENST00000515385 HVCN1Q96D96 273 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 SPDL1Q96EA4 605 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 SPAG5Q96R06 1193 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 LY9Q9HBG7 655 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 LEMD3Q9Y2U8 911 aa14.21□□□□□ -0.14
SMAD1-215ENST00000515385 CCDC96Q2M329 555 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms