RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
TRIM41-206ENST00000514219 OPTNQ96CV9 577 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 ALG1Q9BT22 464 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 TANGO6Q9C0B7 1094 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 RIOX1Q9H6W3 641 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 KCNH4Q9UQ05 1017 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 TMEM232C9JQI7 657 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 STX6O43752 255 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 CETPP11597 493 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 SCG2P13521 617 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 VCAM1P19320 739 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 SLC4A3P48751 1232 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 GNL2Q13823 731 aaKnown RBP18.38■□□□□ 0.53
TRIM41-206ENST00000514219 PFKFB3Q16875 520 aaPredicted RBP18.38■□□□□ 0.53
TRIM41-206ENST00000514219 SLC9C1Q4G0N8 1177 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 SYDE2Q5VT97 1194 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 NBPF11Q86T75 865 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 SLC17A8Q8NDX2 589 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 DDX11Q96FC9 970 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 SLF1Q9BQI6 1058 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 GPCPD1Q9NPB8 672 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 PNMA3Q9UL41 463 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 MYH6P13533 1939 aa18.38■□□□□ 0.53
TRIM41-206ENST00000514219 FRMPD2Q68DX3 1309 aaPredicted RBP18.38■□□□□ 0.53
TRIM41-206ENST00000514219 A0A0G2JLL6 359 aaPredicted RBP18.37■□□□□ 0.53
TRIM41-206ENST00000514219 PNMA6FA0A0J9YX94 578 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 ZBTB5O15062 677 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 PLEKHA8P1O95397 391 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 HMGCS2P54868 508 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 ST3GAL1Q11201 340 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 ZYXQ15942 572 aaKnown RBP18.37■□□□□ 0.53
TRIM41-206ENST00000514219 SHROOM1Q2M3G4 852 aaPredicted RBP18.37■□□□□ 0.53
TRIM41-206ENST00000514219 FAM83BQ5T0W9 1011 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 MCTP2Q6DN12 878 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 KCTD1Q719H9 257 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 PRRT2Q7Z6L0 340 aaPredicted RBP18.37■□□□□ 0.53
TRIM41-206ENST00000514219 SPICE1Q8N0Z3 855 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 SRBD1Q8N5C6 995 aaKnown RBP18.37■□□□□ 0.53
TRIM41-206ENST00000514219 PHKBQ93100 1093 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 PTPN18Q99952 460 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 PTCH2Q9Y6C5 1203 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
TRIM41-206ENST00000514219 LOC285556D6RIA3 1793 aa18.37■□□□□ 0.53
TRIM41-206ENST00000514219 JAK2O60674 1132 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 GNA11P29992 359 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 GJA5P36382 358 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 FUT2Q10981 343 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 STAG2Q8N3U4 1231 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 MB21D1Q8N884 522 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 MAF1Q9H063 256 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 ZSCAN16Q9H4T2 348 aaPredicted RBP18.36■□□□□ 0.53
TRIM41-206ENST00000514219 HOXC10Q9NYD6 342 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 SLC45A1Q9Y2W3 748 aa18.36■□□□□ 0.53
TRIM41-206ENST00000514219 TESPA1A2RU30 521 aaPredicted RBP18.35■□□□□ 0.53
TRIM41-206ENST00000514219 VPS37CA5D8V6 355 aaPredicted RBP18.35■□□□□ 0.53
TRIM41-206ENST00000514219 FLOT1O75955 427 aa18.35■□□□□ 0.53
TRIM41-206ENST00000514219 SYT1P21579 422 aa18.35■□□□□ 0.53
TRIM41-206ENST00000514219 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
TRIM41-206ENST00000514219 FBXO18Q8NFZ0 1043 aa18.35■□□□□ 0.53
TRIM41-206ENST00000514219 AMNQ9BXJ7 453 aa18.35■□□□□ 0.53
TRIM41-206ENST00000514219 RPAP3Q9H6T3 665 aaPredicted RBP18.35■□□□□ 0.53
TRIM41-206ENST00000514219 ZBED4O75132 1171 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 MYCP01106 439 aaPredicted RBP18.34■□□□□ 0.53
TRIM41-206ENST00000514219 OSBPP22059 807 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 DDIT3P35638 169 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 OAZ1P54368 228 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 IRX3P78415 501 aaPredicted RBP18.34■□□□□ 0.53
TRIM41-206ENST00000514219 COG2Q14746 738 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 ZCCHC17Q9NP64 241 aaKnown RBP18.34■□□□□ 0.53
TRIM41-206ENST00000514219 EMILIN3Q9NT22 766 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 AGTPBP1Q9UPW5 1226 aa18.34■□□□□ 0.53
TRIM41-206ENST00000514219 ESYT2A0FGR8 921 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 IRF6O14896 467 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 ZSCAN22P10073 491 aaPredicted RBP18.33■□□□□ 0.52
TRIM41-206ENST00000514219 HOXA7P31268 230 aaPredicted RBP18.33■□□□□ 0.52
TRIM41-206ENST00000514219 COPB2P35606 906 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 CDC37Q16543 378 aaPredicted RBP18.33■□□□□ 0.52
TRIM41-206ENST00000514219 HEATR3Q7Z4Q2 680 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 BRAPQ7Z569 592 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 HOMER1Q86YM7 354 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 MTMR8Q96EF0 704 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 C6orf50Q9HD87 102 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms