RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 DPY19L1Q2PZI1 675 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 LHFPL2Q6ZUX7 228 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 SPATS2Q86XZ4 545 aaKnown RBP6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 OR2W6PQ8NHA6 318 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 DCAF4Q8WV16 495 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 TSR2Q969E8 191 aaKnown RBP6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 C1orf159Q96HA4 380 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 PSMD1Q99460 953 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 PCGF6Q9BYE7 350 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 AKTIPQ9H8T0 292 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 TPX2Q9ULW0 747 aaKnown RBP6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 TSPAN6O43657 245 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 SIGLEC6O43699 453 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 LRRN2O75325 713 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 ALX3O95076 343 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 CRTAMO95727 393 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 NFICP08651 508 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 GLB1P16278 677 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 NAT1P18440 290 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 MCL1Q07820 350 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 MTMR1Q13613 665 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 PIK3R6Q5UE93 754 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 CDCA2Q69YH5 1023 aaPredicted RBP6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 STYK1Q6J9G0 422 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 PI4K2BQ8TCG2 481 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 WHAMMQ8TF30 809 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 FBLIM1Q8WUP2 373 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 RELTQ969Z4 430 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 WNK4Q96J92 1243 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 SMAD5Q99717 465 aaKnown RBP6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 IFT22Q9H7X7 185 aa6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.69□□□□□ -1.34
CALCOCO2-222ENST00000514006 ASXL2Q76L83 1435 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 SCNN1BP51168 640 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 NEK2P51955 445 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 TMPRSS15P98073 1019 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 POU4F1Q01851 419 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 GUCY1A3Q02108 690 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 SCRN1Q12765 414 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 CWF19L1Q69YN2 538 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 GPAT2Q6NUI2 795 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 ZCCHC8Q6NZY4 707 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 SHISA2Q6UWI4 295 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 LINC00114Q6XXX2 140 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 TMC3Q7Z5M5 1100 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 MTDHQ86UE4 582 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 CERS3Q8IU89 383 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 TOP6BLQ8N6T0 577 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 COX4I2Q96KJ9 171 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 PUS7LQ9H0K6 701 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 ASCC2Q9H1I8 757 aaPredicted RBP6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 CHST7Q9NS84 486 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 KCNH3Q9ULD8 1083 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 PCDHA9Q9Y5H5 950 aa6.68□□□□□ -1.34
CALCOCO2-222ENST00000514006 SHTN1A0MZ66 631 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 H0Y8X5 98 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 MEIS1O00470 390 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 DYNC1LI2O43237 492 aaPredicted RBP6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 ZEB2O60315 1214 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 PEX14O75381 377 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 PRAMEF1O95521 474 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 RXRBP28702 533 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 SNRPNP63162 240 aaKnown RBP6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 CDK5R2Q13319 367 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 SART3Q15020 963 aaKnown RBP6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 KCNT2Q6UVM3 1135 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 DDX53Q86TM3 631 aaKnown RBP6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 ANKLE2Q86XL3 938 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 PPIL6Q8IXY8 311 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 SAMD15Q9P1V8 674 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 USP21Q9UK80 565 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 MKL2Q9ULH7 1088 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 RNF112Q9ULX5 631 aa6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 APOBEC2Q9Y235 224 aaKnown RBP6.67□□□□□ -1.34
CALCOCO2-222ENST00000514006 PLEKHD1A6NEE1 506 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 STXBP3O00186 592 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 NEMP1O14524 444 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 KIF3BO15066 747 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 TPD52L2O43399 206 aaKnown RBP6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 EOMESO95936 686 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 SCGB1D2O95969 90 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 GSNP06396 782 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 CD3EP07766 207 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 PYGMP11217 842 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 BPIP17213 487 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 RAB27AP51159 221 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 CYP4F3Q08477 520 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 NMIQ13287 307 aaPredicted RBP6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 GRIK4Q16099 956 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 SGO2Q562F6 1265 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 DENND5AQ6IQ26 1287 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 Q6ZS46 218 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 KIF18BQ86Y91 864 aa6.66□□□□□ -1.34
CALCOCO2-222ENST00000514006 SVOPQ8N4V2 548 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms