RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 LONRF2Q1L5Z9 754 aa6□□□□□ -1.45
HTT-210ENST00000512909 TMEM67Q5HYA8 995 aa6□□□□□ -1.45
HTT-210ENST00000512909 CRTC3Q6UUV7 619 aa6□□□□□ -1.45
HTT-210ENST00000512909 NSMFQ6X4W1 530 aa6□□□□□ -1.45
HTT-210ENST00000512909 RNF111Q6ZNA4 994 aa6□□□□□ -1.45
HTT-210ENST00000512909 TRIM59Q8IWR1 403 aa6□□□□□ -1.45
HTT-210ENST00000512909 SPACA3Q8IXA5 215 aa6□□□□□ -1.45
HTT-210ENST00000512909 ZBTB38Q8NAP3 1195 aaPredicted RBP6□□□□□ -1.45
HTT-210ENST00000512909 BTN2A2Q8WVV5 523 aa6□□□□□ -1.45
HTT-210ENST00000512909 TCTN2Q96GX1 697 aa6□□□□□ -1.45
HTT-210ENST00000512909 ZC3H7BQ9UGR2 993 aaKnown RBP6□□□□□ -1.45
HTT-210ENST00000512909 VAV3Q9UKW4 847 aa6□□□□□ -1.45
HTT-210ENST00000512909 TCFL5Q9UL49 500 aa6□□□□□ -1.45
HTT-210ENST00000512909 SLC5A6Q9Y289 635 aa6□□□□□ -1.45
HTT-210ENST00000512909 GPR55Q9Y2T6 319 aaPredicted RBP6□□□□□ -1.45
HTT-210ENST00000512909 PTCH2Q9Y6C5 1203 aa6□□□□□ -1.45
HTT-210ENST00000512909 KIF21AQ7Z4S6 1674 aa6□□□□□ -1.45
HTT-210ENST00000512909 CNTNAP4Q9C0A0 1308 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 A0A1W2PQ27 194 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 A0A1W2PQ64 194 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 A0A1W2PQC6 194 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 A0A1W2PQD8 194 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 A0A1W2PQU0 124 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 LOC105371045A0A1W2PR82 267 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 HSD3B2P26439 372 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 HOXC12P31275 282 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 SUMO1P63165 101 aaKnown RBP5.99□□□□□ -1.45
HTT-210ENST00000512909 PRKCQQ04759 706 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 NKPD1Q17RQ9 610 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 RNF187Q5TA31 235 aaPredicted RBP5.99□□□□□ -1.45
HTT-210ENST00000512909 ANGEL2Q5VTE6 544 aaKnown RBP5.99□□□□□ -1.45
HTT-210ENST00000512909 GTF2IRD2BQ6EKJ0 949 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 GTF2IRD2Q86UP8 949 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 JAZF1Q86VZ6 243 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 SCUBE1Q8IWY4 988 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 LILRB2Q8N423 598 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 CCDC120Q96HB5 630 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 HDAC8Q9BY41 377 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 FOXP3Q9BZS1 431 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 SUSD2Q9UGT4 822 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 BACE2Q9Y5Z0 518 aa5.99□□□□□ -1.45
HTT-210ENST00000512909 TRBV23OR9-2A0A075B6M9 112 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 ESYT3A0FGR9 886 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 STXBP3O00186 592 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 SHOXO15266 292 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 ITGB2P05107 769 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 FAM153BP0C7A2 387 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 BMP8BP34820 402 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 XP32Q5T750 250 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 C16orf86Q6ZW13 317 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 WAPLQ7Z5K2 1190 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 JAMLQ86YT9 394 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 FAM177A1Q8N128 213 aaPredicted RBP5.98□□□□□ -1.45
HTT-210ENST00000512909 SYNPOQ8N3V7 929 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 RNPC3Q96LT9 517 aaKnown RBP5.98□□□□□ -1.45
HTT-210ENST00000512909 IER2Q9BTL4 223 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 DUSP15Q9H1R2 295 aaPredicted RBP5.98□□□□□ -1.45
HTT-210ENST00000512909 TBX22Q9Y458 520 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 ST14Q9Y5Y6 855 aa5.98□□□□□ -1.45
HTT-210ENST00000512909 SHISA3A0PJX4 238 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 C2orf71A6NGG8 1288 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 ASMTLO95671 621 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 TBC1D8O95759 1140 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 SSTR4P31391 388 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 SCRN1Q12765 414 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 FLCNQ8NFG4 579 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 DHRS4Q9BTZ2 278 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 ATP13A1Q9HD20 1204 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 CYP26B1Q9NR63 512 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 MINPP1Q9UNW1 487 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 PLAGL2Q9UPG8 496 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 PITPNM2Q9BZ72 1349 aa5.97□□□□□ -1.45
HTT-210ENST00000512909 COL17A1Q9UMD9 1497 aaPredicted RBP5.96□□□□□ -1.45
HTT-210ENST00000512909 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 PRR19A6NJB7 356 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 MEFVO15553 781 aaPredicted RBP5.96□□□□□ -1.46
HTT-210ENST00000512909 MYO1BO43795 1136 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 FGFR1P11362 822 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 PABPC1P11940 636 aaKnown RBP5.96□□□□□ -1.46
HTT-210ENST00000512909 VAV1P15498 845 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 NAT1P18440 290 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 PAMP19021 973 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 L1CAMP32004 1257 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 ZP2Q05996 745 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 DUSP4Q13115 394 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 EEF1DP3Q658K8 133 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 USP53Q70EK8 1073 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 VSIG10LQ86VR7 867 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 LINC00116Q8NCU8 138 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 MRGPRX3Q96LB0 322 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 LGR4Q9BXB1 951 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 NKX2-4Q9H2Z4 354 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 PCMTD2Q9NV79 361 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 PCDHA11Q9Y5I1 949 aa5.96□□□□□ -1.46
HTT-210ENST00000512909 THOC2Q8NI27 1593 aaKnown RBP5.96□□□□□ -1.46
HTT-210ENST00000512909 URB2Q14146 1524 aaKnown RBP5.95□□□□□ -1.46
HTT-210ENST00000512909 ANKRD62A6NC57 917 aa5.95□□□□□ -1.46
HTT-210ENST00000512909 ENPP3O14638 875 aa5.95□□□□□ -1.46
HTT-210ENST00000512909 ADAM23O75077 832 aa5.95□□□□□ -1.46
HTT-210ENST00000512909 SRFP11831 508 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms