RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CCDC129Q6ZRS4 1044 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 RNPC3Q96LT9 517 aaKnown RBP14.93□□□□□ -0.02
VEGFA-216ENST00000512683 CRBNQ96SW2 442 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 NAPBQ9H115 298 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 RAVER2Q9HCJ3 691 aaKnown RBP14.93□□□□□ -0.02
VEGFA-216ENST00000512683 EPB41L4AQ9HCS5 686 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-216ENST00000512683 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-216ENST00000512683 PLIN4Q96Q06 1357 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 COL6A3P12111 3177 aa14.93□□□□□ -0.02
VEGFA-216ENST00000512683 A0A0G2JMZ2 1700 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 ITGB8P26012 769 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 SLC1A4P43007 532 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 GNASQ5JWF2 1037 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 ZMYM1Q5SVZ6 1142 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 RCSD1Q6JBY9 416 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 MFSD5Q6N075 450 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-216ENST00000512683 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
VEGFA-216ENST00000512683 ACAD9Q9H845 621 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 PNMA2Q9UL42 364 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 Q9Y3F1 56 aa14.92□□□□□ -0.02
VEGFA-216ENST00000512683 GREB1LQ9C091 1923 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-216ENST00000512683 LOC102724159A0A0B4J2E5 919 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 A0A0U1RQG5 324 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-216ENST00000512683 TMEM232C9JQI7 657 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 M0R2C6 588 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 ARVCFO00192 962 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 TLR3O15455 904 aaKnown RBP14.91□□□□□ -0.02
VEGFA-216ENST00000512683 PRDM1O75626 825 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 ASGR1P07306 291 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 C6orf222P0C671 652 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-216ENST00000512683 PPARAQ07869 468 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 PPIGQ13427 754 aaKnown RBP eCLIP14.91□□□□□ -0.027e-9■■□□□ 12.3
VEGFA-216ENST00000512683 PWP2Q15269 919 aaKnown RBP14.91□□□□□ -0.02
VEGFA-216ENST00000512683 CCDC144BQ3MJ40 725 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 ARMCX2Q7L311 632 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 STK11IPQ8N1F8 1099 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 FAM133AQ8N9E0 248 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 FAM161BQ96MY7 647 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 TBX21Q9UL17 535 aa14.91□□□□□ -0.02
VEGFA-216ENST00000512683 ZEB2O60315 1214 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 NOVP48745 357 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 SLC4A3P48751 1232 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 IQSEC1Q6DN90 963 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 TMEM199Q8N511 208 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 PI4K2BQ8TCG2 481 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 VTI1AQ96AJ9 217 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 ANAPC4Q9UJX5 808 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
VEGFA-216ENST00000512683 FGRP09769 529 aa14.89□□□□□ -0.03
VEGFA-216ENST00000512683 TNFAIP2Q03169 654 aa14.89□□□□□ -0.03
VEGFA-216ENST00000512683 ALX1Q15699 326 aa14.89□□□□□ -0.03
VEGFA-216ENST00000512683 CCDC144CPQ8IYA2 1237 aa14.89□□□□□ -0.03
VEGFA-216ENST00000512683 LRRC47Q8N1G4 583 aaKnown RBP14.89□□□□□ -0.03
VEGFA-216ENST00000512683 SLC43A3Q8NBI5 491 aa14.89□□□□□ -0.03
VEGFA-216ENST00000512683 MAFAQ8NHW3 353 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-216ENST00000512683 FGD4Q96M96 766 aa14.89□□□□□ -0.03
VEGFA-216ENST00000512683 KATNBL1Q9H079 304 aa14.89□□□□□ -0.03
VEGFA-216ENST00000512683 TTYH1Q9H313 450 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-216ENST00000512683 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-216ENST00000512683 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-216ENST00000512683 TSPY2A6NKD2 308 aa14.88□□□□□ -0.03
VEGFA-216ENST00000512683 MCCP23508 829 aa14.88□□□□□ -0.03
VEGFA-216ENST00000512683 NT5C2P49902 561 aa14.88□□□□□ -0.03
VEGFA-216ENST00000512683 EPHB4P54760 987 aa14.88□□□□□ -0.03
VEGFA-216ENST00000512683 PSRC1Q6PGN9 363 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-216ENST00000512683 SYMPKQ92797 1274 aaKnown RBP14.88□□□□□ -0.03
VEGFA-216ENST00000512683 TRERF1Q96PN7 1200 aa14.88□□□□□ -0.03
VEGFA-216ENST00000512683 COL25A1Q9BXS0 654 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-216ENST00000512683 MTIF3Q9H2K0 278 aaKnown RBP14.88□□□□□ -0.03
VEGFA-216ENST00000512683 A1CFQ9NQ94 594 aaKnown RBP14.88□□□□□ -0.03
VEGFA-216ENST00000512683 RNF146Q9NTX7 359 aa14.88□□□□□ -0.03
VEGFA-216ENST00000512683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■□□□□ 9
VEGFA-216ENST00000512683 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
VEGFA-216ENST00000512683 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
VEGFA-216ENST00000512683 ORC4O43929 436 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 MX1P20591 662 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 IKQ13123 557 aaPredicted RBP14.87□□□□□ -0.03
VEGFA-216ENST00000512683 RASIP1Q5U651 963 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 FAM126BQ8IXS8 530 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 MORC4Q8TE76 937 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 LENG1Q96BZ8 264 aaPredicted RBP14.87□□□□□ -0.03
VEGFA-216ENST00000512683 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 SEC62Q99442 399 aaKnown RBP14.87□□□□□ -0.03
VEGFA-216ENST00000512683 MAF1Q9H063 256 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 AP5M1Q9H0R1 490 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 HELLSQ9NRZ9 838 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 TCP11L1Q9NUJ3 509 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 STX8Q9UNK0 236 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 GNEQ9Y223 722 aaKnown RBP14.87□□□□□ -0.03
VEGFA-216ENST00000512683 ZNF536O15090 1300 aa14.87□□□□□ -0.03
VEGFA-216ENST00000512683 MYADML2A6NDP7 307 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 SOWAHBA6NEL2 793 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 CTAGE5O15320 804 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 CD4P01730 458 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
VEGFA-216ENST00000512683 FOSL2P15408 326 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 CNTN2Q02246 1040 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms