RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 CETPP11597 493 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 HOXB1P14653 301 aaPredicted RBP10.94□□□□□ -0.66
MSH3-203ENST00000512531 VGLL4Q14135 290 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 CCL15Q16663 113 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 CCDC178Q5BJE1 867 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 SGMS1Q86VZ5 419 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 STAG1Q8WVM7 1258 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
MSH3-203ENST00000512531 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
MSH3-203ENST00000512531 RBSNQ9H1K0 784 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 TDRD3Q9H7E2 651 aaKnown RBP10.94□□□□□ -0.66
MSH3-203ENST00000512531 PRM3Q9NNZ6 103 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 ABCF2Q9UG63 623 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 MTMR7Q9Y216 660 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 OTOFQ9HC10 1997 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 MKI67P46013 3256 aaKnown RBP10.94□□□□□ -0.66
MSH3-203ENST00000512531 STK36Q9NRP7 1315 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 SH2B2O14492 632 aaPredicted RBP10.93□□□□□ -0.66
MSH3-203ENST00000512531 TLR2O60603 784 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 YEATS4O95619 227 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 EN2P19622 333 aaPredicted RBP10.93□□□□□ -0.66
MSH3-203ENST00000512531 GYG1P46976 350 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 BCAMP50895 628 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
MSH3-203ENST00000512531 MTMR2Q13614 643 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 KIF22Q14807 665 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 WTAPQ15007 396 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 STK38Q15208 465 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 IQCA1Q86XH1 822 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 ERO1BQ86YB8 467 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 SLF2Q8IX21 1173 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 PRR7Q8TB68 274 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 TEKT1Q969V4 418 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 ZDHHC15Q96MV8 337 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
MSH3-203ENST00000512531 ZNF287Q9HBT7 754 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 HOOK1Q9UJC3 728 aaKnown RBP10.93□□□□□ -0.66
MSH3-203ENST00000512531 TAF6LQ9Y6J9 622 aa10.93□□□□□ -0.66
MSH3-203ENST00000512531 SALL1Q9NSC2 1324 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 LDHCP07864 332 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 CAPN2P17655 700 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 ME1P48163 572 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 PSEN2P49810 448 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 TPM4P67936 248 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 CAP1Q01518 475 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 PPIL2Q13356 520 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 SNAPC2Q13487 334 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 DCAF15Q66K64 600 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 HHIPL2Q6UWX4 724 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 PI16Q6UXB8 463 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 FBXO18Q8NFZ0 1043 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 WDR66Q8TBY9 1149 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 TMEM39BQ9GZU3 492 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 CLSTN2Q9H4D0 955 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 ARMT1Q9H993 441 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 BRMS1Q9HCU9 246 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 RBM28Q9NW13 759 aaKnown RBP10.92□□□□□ -0.66
MSH3-203ENST00000512531 TMOD2Q9NZR1 351 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
MSH3-203ENST00000512531 RCOR1Q9UKL0 485 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 CEP131Q9UPN4 1083 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 PTCH2Q9Y6C5 1203 aa10.92□□□□□ -0.66
MSH3-203ENST00000512531 PALM3A6NDB9 673 aaPredicted RBP10.91□□□□□ -0.66
MSH3-203ENST00000512531 B4E1Z4 1266 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 TCP10L2B9ZVM9 353 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 BAG3O95817 575 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 LACTBP83111 547 aaPredicted RBP10.91□□□□□ -0.66
MSH3-203ENST00000512531 PPATQ06203 517 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 PDE4BQ07343 736 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 DHX8Q14562 1220 aaKnown RBP10.91□□□□□ -0.66
MSH3-203ENST00000512531 CHST3Q7LGC8 479 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 FAM200AQ8TCP9 573 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 PDLIM2Q96JY6 352 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 ATP8A2Q9NTI2 1148 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 RTEL1Q9NZ71 1219 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 ANAPC4Q9UJX5 808 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 SNCAIPQ9Y6H5 919 aa10.91□□□□□ -0.66
MSH3-203ENST00000512531 CENPFP49454 3210 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 A0A1W2PQ27 194 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 A0A1W2PQ64 194 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 A0A1W2PQD8 194 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 GOLGA6L19H0YKK7 550 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 CHGBP05060 677 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 HOXD10P28358 340 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 FXR1P51114 621 aaKnown RBP eCLIP10.9□□□□□ -0.66
MSH3-203ENST00000512531 PPARAQ07869 468 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 FUT2Q10981 343 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 RTN1Q16799 776 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 RRP12Q5JTH9 1297 aaKnown RBP10.9□□□□□ -0.66
MSH3-203ENST00000512531 TMCO4Q5TGY1 634 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 ADALQ6DHV7 355 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 APOA5Q6Q788 366 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 DZIP1Q86YF9 867 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms