RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 KIF5AQ12840 1032 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 CLEC4GQ6UXB4 293 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 TAF4BQ92750 862 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 ACBD3Q9H3P7 528 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
PRDM16-207ENST00000512462 MRC1P22897 1456 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 AFF2P51816 1311 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 SLFN14P0C7P3 912 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 CYLC1P35663 651 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-207ENST00000512462 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 NEK8Q86SG6 692 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 C2CD5Q86YS7 1000 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 ERO1AQ96HE7 468 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L15C9J2P7 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L13C9JLJ4 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L11C9JVI0 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L18D6R9N7 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L22D6RA61 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L17D6RBQ6 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L19D6RCP7 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L20D6RJB6 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 H0YIN7 160 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L24Q0WX57 530 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
PRDM16-207ENST00000512462 ODF2Q5BJF6 829 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L6PQ6QN14 398 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 IMPACTQ9P2X3 320 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 PCDHA1Q9Y5I3 950 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 PPEF1O14829 653 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-207ENST00000512462 HOXA13P31271 388 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-207ENST00000512462 EARS2Q5JPH6 523 aaKnown RBP13.34□□□□□ -0.27
PRDM16-207ENST00000512462 RRAGAQ7L523 313 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 PSTPIP2Q9H939 334 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 COL5A2P05997 1499 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-207ENST00000512462 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 PRPF3O43395 683 aaKnown RBP13.34□□□□□ -0.27
PRDM16-207ENST00000512462 DDAH1O94760 285 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-207ENST00000512462 PLCG1P19174 1290 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 SPATA1Q5VX52 437 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
PRDM16-207ENST00000512462 GOLGA6L9A6NEM1 432 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 PAFAH1B1P43034 410 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 SF3A3Q12874 501 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 LLGL1Q15334 1064 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 TOGARAM2Q6ZUX3 1019 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 ENGASEQ8NFI3 743 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 PCDHA12Q9UN75 941 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 THRAP3Q9Y2W1 955 aaKnown RBP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 FAM114A1Q8IWE2 563 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 TPH2Q8IWU9 490 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 LUC7LQ9NQ29 371 aaKnown RBP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 TMEM110-MUSTN1A8MSY1 372 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 PABPC4Q13310 644 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 CERKLQ49MI3 558 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 TTBK2Q6IQ55 1244 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 SMCR8Q8TEV9 937 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 GOLGA1Q92805 767 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 PYM1Q9BRP8 204 aaKnown RBP13.33□□□□□ -0.28
PRDM16-207ENST00000512462 PCDHA4Q9UN74 947 aa13.33□□□□□ -0.28
PRDM16-207ENST00000512462 LEKR1Q6ZMV7 388 aa13.32□□□□□ -0.28
PRDM16-207ENST00000512462 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-207ENST00000512462 PPP1R12BO60237 982 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-207ENST00000512462 MYCLP12524 364 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-207ENST00000512462 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-207ENST00000512462 ICA1Q05084 483 aa13.32□□□□□ -0.28
PRDM16-207ENST00000512462 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
PRDM16-207ENST00000512462 IFT81Q8WYA0 676 aa13.32□□□□□ -0.28
PRDM16-207ENST00000512462 NBPF3Q9H094 633 aa13.32□□□□□ -0.28
PRDM16-207ENST00000512462 KIAA1024Q9UPX6 916 aa13.32□□□□□ -0.28
PRDM16-207ENST00000512462 LEMD3Q9Y2U8 911 aa13.32□□□□□ -0.28
PRDM16-207ENST00000512462 BUB1O43683 1085 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 KRT86O43790 486 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 EIF3JO75822 258 aaKnown RBP13.31□□□□□ -0.28
PRDM16-207ENST00000512462 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
PRDM16-207ENST00000512462 COPB1P53618 953 aaKnown RBP13.31□□□□□ -0.28
PRDM16-207ENST00000512462 TAX1BP1Q86VP1 789 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 CCDC113Q9H0I3 377 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 TDRD3Q9H7E2 651 aaKnown RBP13.31□□□□□ -0.28
PRDM16-207ENST00000512462 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 SFI1A8K8P3 1242 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 HARSP12081 509 aaKnown RBP13.31□□□□□ -0.28
PRDM16-207ENST00000512462 GRIK5Q16478 980 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 CCDC84Q86UT8 332 aaPredicted RBP13.31□□□□□ -0.28
PRDM16-207ENST00000512462 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 GOPCQ9HD26 462 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms