RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ORC4O43929 436 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 IGSF3O75054 1194 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 MORC3Q14149 939 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 LONRF3Q496Y0 759 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 C11orf57Q6ZUT1 292 aaPredicted RBP14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 FMNL3Q8IVF7 1028 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 NEFHP12036 1026 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 GCFC2P16383 781 aaKnown RBP14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 PTPREP23469 700 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 CASP7P55210 303 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 IRX3P78415 501 aaPredicted RBP14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 FBXO33Q7Z6M2 555 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 TBC1D16Q8TBP0 767 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 PNMA2Q9UL42 364 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 ADKP55263 362 aaKnown RBP14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 PLA2G4DQ86XP0 818 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 IFT74Q96LB3 600 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 SELENOOQ9BVL4 669 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 MAGEF1Q9HAY2 307 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 KCNJ18B7U540 433 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 KCNJ12Q14500 433 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 VWA3BQ502W6 1294 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 MCF2L2Q86YR7 1114 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 TDRD3Q9H7E2 651 aaKnown RBP14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 CCPG1Q9ULG6 757 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 IKBKBO14920 756 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 PFKFB3Q16875 520 aaPredicted RBP14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 DALRD3Q5D0E6 543 aaKnown RBP14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 C12orf60Q5U649 245 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 CIAPIN1Q6FI81 312 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 TMEM179Q6ZVK1 233 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 PAF1Q8N7H5 531 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 EPSTI1Q96J88 318 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 EXOC3O60645 756 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 TUBB4BP68371 445 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 SETQ01105 290 aaPredicted RBP14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 DPY19L2Q6NUT2 758 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 GOLGA1Q92805 767 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 SLC39A2Q9NP94 309 aa14.58□□□□□ -0.08
PCDHA4-202ENST00000512229 TESPA1A2RU30 521 aaPredicted RBP14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 FAM26FQ5R3K3 315 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 ARL6IP4Q66PJ3 421 aaKnown RBP14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 MIER3Q7Z3K6 550 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 GRAMD1CQ8IYS0 662 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 CEP95Q96GE4 821 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 IVNS1ABPQ9Y6Y0 642 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 CYP4A11Q02928 519 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 OR8K1Q8NGG5 319 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 EEF2KMTQ96G04 330 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 FNBP1Q96RU3 617 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 TAOK3Q9H2K8 898 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 CPVLQ9H3G5 476 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 PNMA6FA0A0J9YX94 578 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 GSTTP1A0A1W2PQM5 241 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 PRPHP41219 470 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 DNM2P50570 870 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 GRM1Q13255 1194 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 TAX1BP1Q86VP1 789 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 SULF1Q8IWU6 871 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 SH3GLB2Q9NR46 395 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 FAM207AQ9NSI2 230 aaPredicted RBP14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 PIM2Q9P1W9 311 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 EXOC7Q9UPT5 735 aa14.57□□□□□ -0.08
PCDHA4-202ENST00000512229 NOP56O00567 594 aaKnown RBP14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 ECE2O60344 883 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 GH2P01242 217 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 CTNNA2P26232 953 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 KIAA0753Q2KHM9 967 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 MIGA2Q7L4E1 593 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 NEDD1Q8NHV4 660 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 KIAA1024Q9UPX6 916 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 SUGT1Q9Y2Z0 365 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 POLR3GO15318 223 aaPredicted RBP14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 STAT2P52630 851 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 NCBP1Q09161 790 aaKnown RBP14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 SEPT7Q16181 437 aaKnown RBP14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 LRRC8AQ8IWT6 810 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 LARP4BQ92615 738 aaKnown RBP14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 GOLGA6L10A0A0M3HER8 536 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 GNPTABQ3T906 1256 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 ATP6V0A2Q9Y487 856 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 PCDHB13Q9Y5F0 798 aa14.56□□□□□ -0.08
PCDHA4-202ENST00000512229 ZNF500O60304 480 aaPredicted RBP14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 IFFO1Q0D2I5 559 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 SLC10A5Q5PT55 438 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 ARHGEF16Q5VV41 709 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 CCDC51Q96ER9 411 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 CAPZA3Q96KX2 299 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 PANK4Q9NVE7 773 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 BCL9O00512 1426 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 EN1Q05925 392 aaPredicted RBP14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 BIRC3Q13489 604 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 AOC3Q16853 763 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 OXER1Q8TDS5 423 aa14.55□□□□□ -0.08
PCDHA4-202ENST00000512229 TSGA10Q9BZW7 698 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms