RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SDR42E1Q8WUS8 393 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 DYNLL2Q96FJ2 89 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 NOC4LQ9BVI4 516 aaKnown RBP13.96□□□□□ -0.18
RNF4-216ENST00000511859 TLR7Q9NYK1 1049 aaKnown RBP13.96□□□□□ -0.18
RNF4-216ENST00000511859 UMODL1Q5DID0 1318 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 SMIM22K7EJ46 135 aa13.95□□□□□ -0.18
RNF4-216ENST00000511859 ZEB2O60315 1214 aa13.95□□□□□ -0.18
RNF4-216ENST00000511859 CDK8P49336 464 aa13.95□□□□□ -0.18
RNF4-216ENST00000511859 FAM83BQ5T0W9 1011 aa13.95□□□□□ -0.18
RNF4-216ENST00000511859 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
RNF4-216ENST00000511859 SLF1Q9BQI6 1058 aa13.95□□□□□ -0.18
RNF4-216ENST00000511859 ATP8A2Q9NTI2 1148 aa13.95□□□□□ -0.18
RNF4-216ENST00000511859 RIPK3Q9Y572 518 aa13.95□□□□□ -0.18
RNF4-216ENST00000511859 LRRC37A2A6NM11 1700 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 RFXAPO00287 272 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 BCAR3O75815 825 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 CA3P07451 260 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 CYP2D6P10635 497 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 TRIM27P14373 513 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 PDE6AP16499 860 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 BEX3Q00994 111 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 TNFAIP2Q03169 654 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 CXCL17Q6UXB2 119 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 ARMCX2Q7L311 632 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 PHOSPHO2Q8TCD6 241 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 WNT8AQ9H1J5 351 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
RNF4-216ENST00000511859 WDFY4Q6ZS81 3184 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 BAZ2AQ9UIF9 1905 aaKnown RBP13.93□□□□□ -0.18
RNF4-216ENST00000511859 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 PRR33A8MZF0 331 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 KIF28PB7ZC32 967 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 RAD21O60216 631 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 B4GALT4O60513 344 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 ZBED4O75132 1171 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 C12orf60Q5U649 245 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
RNF4-216ENST00000511859 CCDC144CPQ8IYA2 1237 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 CHST13Q8NET6 341 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.18
RNF4-216ENST00000511859 AGBL1Q96MI9 1066 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 KATNBL1Q9H079 304 aa13.93□□□□□ -0.18
RNF4-216ENST00000511859 CTDP1Q9Y5B0 961 aaPredicted RBP13.93□□□□□ -0.18
RNF4-216ENST00000511859 GRIN2DO15399 1336 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 FAM86C2PA6NEL3 165 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 SUPT20HL2P0C7V6 817 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 ACTN1P12814 892 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 FSCN1Q16658 493 aaKnown RBP13.92□□□□□ -0.18
RNF4-216ENST00000511859 C16orf86Q6ZW13 317 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 CPXCR1Q8N123 301 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 LCORLQ8N3X6 602 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 SLC9A7Q96T83 725 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 TRPV6Q9H1D0 765 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 CERS4Q9HA82 394 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 LMCD1Q9NZU5 365 aa13.92□□□□□ -0.18
RNF4-216ENST00000511859 GNEQ9Y223 722 aaKnown RBP13.92□□□□□ -0.18
RNF4-216ENST00000511859 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
RNF4-216ENST00000511859 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
RNF4-216ENST00000511859 TTLL4Q14679 1199 aa13.91□□□□□ -0.18
RNF4-216ENST00000511859 SCLYQ96I15 445 aa13.91□□□□□ -0.18
RNF4-216ENST00000511859 FGD4Q96M96 766 aa13.91□□□□□ -0.18
RNF4-216ENST00000511859 Q9Y3F1 56 aa13.91□□□□□ -0.18
RNF4-216ENST00000511859 EPOPA6NHQ4 379 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 USP17L21D6R901 530 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 F5H6K3 240 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 MRE11P49959 708 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 OAZ1P54368 228 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 TAP1Q03518 808 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 KLRC3Q07444 240 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 KRT40Q6A162 431 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 TLK2Q86UE8 772 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 ARNTL2Q8WYA1 636 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 KCNH6Q9H252 994 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 SLC38A10Q9HBR0 1119 aa13.9□□□□□ -0.18
RNF4-216ENST00000511859 ASTN1O14525 1302 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.89□□□□□ -0.19
RNF4-216ENST00000511859 ASB14A6NK59 587 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
RNF4-216ENST00000511859 PRKAB2O43741 272 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 ALADP13716 330 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 RFC2P35250 354 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 IQSEC1Q6DN90 963 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 AACSQ86V21 672 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 ERC1Q8IUD2 1116 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
RNF4-216ENST00000511859 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
RNF4-216ENST00000511859 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
RNF4-216ENST00000511859 CD320Q9NPF0 282 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 NYAP2Q9P242 653 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 SCN5AQ14524 2016 aa13.89□□□□□ -0.19
RNF4-216ENST00000511859 FDX1P10109 184 aa13.88□□□□□ -0.19
RNF4-216ENST00000511859 GRB10Q13322 594 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms