RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 SLC4A3P48751 1232 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 KCNQ1P51787 676 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 OTOP2Q7RTS6 562 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 ZNF467Q7Z7K2 595 aaPredicted RBP22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 ERC1Q8IUD2 1116 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 SLC43A3Q8NBI5 491 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 SLC28A3Q9HAS3 691 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 LRRC37A2A6NM11 1700 aa22.89■■□□□ 1.26
HMGCS1-206ENST00000511774 FGBP02675 491 aa22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 HOXD11P31277 338 aaPredicted RBP22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 CTR9Q6PD62 1173 aa22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 ARMCX2Q7L311 632 aa22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 CPXCR1Q8N123 301 aa22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 MICALL1Q8N3F8 863 aa22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 WNT8AQ9H1J5 351 aa22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 DDX49Q9Y6V7 483 aaKnown RBP22.89■■□□□ 1.25
HMGCS1-206ENST00000511774 NDUFB10O96000 172 aa22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 CCL23P55773 120 aa22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 NKX3-2P78367 333 aa22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 CXCL17Q6UXB2 119 aa22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 ABHD16BQ9H3Z7 469 aa22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 HIPK3Q9H422 1215 aa22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 RAVER2Q9HCJ3 691 aaKnown RBP22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 BRWD1Q9NSI6 2320 aa22.88■■□□□ 1.25
HMGCS1-206ENST00000511774 ATP2A1O14983 1001 aa22.87■■□□□ 1.25
HMGCS1-206ENST00000511774 TLR3O15455 904 aaKnown RBP22.87■■□□□ 1.25
HMGCS1-206ENST00000511774 CNTN2Q02246 1040 aa22.87■■□□□ 1.25
HMGCS1-206ENST00000511774 CCDC144CPQ8IYA2 1237 aa22.87■■□□□ 1.25
HMGCS1-206ENST00000511774 SCN5AQ14524 2016 aa22.87■■□□□ 1.25
HMGCS1-206ENST00000511774 F5H6K3 240 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 RFXAPO00287 272 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 RASA1P20936 1047 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 KLRC3Q07444 240 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 IL27Q8NEV9 243 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 NOC4LQ9BVI4 516 aaKnown RBP22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 TRPV6Q9H1D0 765 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 SPC25Q9HBM1 224 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 PAG1Q9NWQ8 432 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 PIEZO1Q92508 2521 aa22.86■■□□□ 1.25
HMGCS1-206ENST00000511774 TMEM63BQ5T3F8 832 aa22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 STK11IPQ8N1F8 1099 aa22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 PRPF38AQ8NAV1 312 aaKnown RBP22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 BOLA2Q9H3K6 86 aa22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 EPHX3Q9H6B9 360 aa22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 SLC38A10Q9HBR0 1119 aa22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 SLC4A4Q9Y6R1 1079 aa22.85■■□□□ 1.25
HMGCS1-206ENST00000511774 PPP2R2DQ66LE6 453 aa22.84■■□□□ 1.25
HMGCS1-206ENST00000511774 KRT40Q6A162 431 aa22.84■■□□□ 1.25
HMGCS1-206ENST00000511774 KIFC2Q96AC6 838 aa22.84■■□□□ 1.25
HMGCS1-206ENST00000511774 PUS7LQ9H0K6 701 aaKnown RBP22.84■■□□□ 1.25
HMGCS1-206ENST00000511774 NYAP2Q9P242 653 aa22.84■■□□□ 1.25
HMGCS1-206ENST00000511774 GNEQ9Y223 722 aaKnown RBP22.84■■□□□ 1.25
HMGCS1-206ENST00000511774 LCTP09848 1927 aa22.84■■□□□ 1.25
HMGCS1-206ENST00000511774 MUC6Q6W4X9 2439 aa22.83■■□□□ 1.25
HMGCS1-206ENST00000511774 EPOPA6NHQ4 379 aa22.83■■□□□ 1.25
HMGCS1-206ENST00000511774 B4GALT4O60513 344 aa22.83■■□□□ 1.25
HMGCS1-206ENST00000511774 ANKRD35Q8N283 1001 aa22.83■■□□□ 1.25
HMGCS1-206ENST00000511774 SCLYQ96I15 445 aa22.83■■□□□ 1.25
HMGCS1-206ENST00000511774 IGKV6D-41A0A0C4DH26 115 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 SOWAHBA6NEL2 793 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 ARHGEF15O94989 841 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 PSMC6P62333 389 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 TNFAIP2Q03169 654 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 ITGA7Q13683 1181 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 CLASRPQ8N2M8 674 aaKnown RBP22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 FAM133AQ8N9E0 248 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 KHSRPQ92945 711 aaKnown RBP eCLIP22.82■■□□□ 1.241e-21■■■□□ 18.6
HMGCS1-206ENST00000511774 AGBL1Q96MI9 1066 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 LRFN3Q9BTN0 628 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 C1QTNF1Q9BXJ1 281 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 MTIF3Q9H2K0 278 aaKnown RBP22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 PCDHA11Q9Y5I1 949 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 MTCH2Q9Y6C9 303 aa22.82■■□□□ 1.24
HMGCS1-206ENST00000511774 ZBED4O75132 1171 aa22.81■■□□□ 1.24
HMGCS1-206ENST00000511774 TTLL4Q14679 1199 aa22.81■■□□□ 1.24
HMGCS1-206ENST00000511774 AMOTL1Q8IY63 956 aa22.81■■□□□ 1.24
HMGCS1-206ENST00000511774 CERS4Q9HA82 394 aa22.81■■□□□ 1.24
HMGCS1-206ENST00000511774 HOMER2Q9NSB8 354 aa22.81■■□□□ 1.24
HMGCS1-206ENST00000511774 SLC4A7Q9Y6M7 1214 aa22.81■■□□□ 1.24
HMGCS1-206ENST00000511774 ERC2O15083 957 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 IFIT2P09913 472 aaKnown RBP22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 SMPD1P17405 629 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 UBE3CQ15386 1083 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 FSCN1Q16658 493 aaKnown RBP22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 SIRT2Q8IXJ6 389 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 CHST13Q8NET6 341 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 TET1Q8NFU7 2136 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 PANK1Q8TE04 598 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 KIF1BPQ96EK5 621 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 PDGFCQ9NRA1 345 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 CLIP2Q9UDT6 1046 aa22.8■■□□□ 1.24
HMGCS1-206ENST00000511774 HSP90AB4PQ58FF6 505 aa22.79■■□□□ 1.24
HMGCS1-206ENST00000511774 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms