RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 TJAP1Q5JTD0 557 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 SLFN13Q68D06 897 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 NOL8Q76FK4 1167 aaKnown RBP12.42□□□□□ -0.42
DDX41-211ENST00000510171 ARMCX2Q7L311 632 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 CCDC144CPQ8IYA2 1237 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 KBTBD3Q8NAB2 608 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 GMCL1P1Q8NEA9 526 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 CEP95Q96GE4 821 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 FGD4Q96M96 766 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 DNAH12Q6ZR08 3092 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 GRXCR1A8MXD5 290 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 PATL2C9JE40 543 aaKnown RBP12.41□□□□□ -0.42
DDX41-211ENST00000510171 GPAA1O43292 621 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 ADCY6O43306 1168 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 ZFYP08048 801 aaPredicted RBP12.41□□□□□ -0.42
DDX41-211ENST00000510171 FDX1P10109 184 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 ACRP10323 421 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 BMP3P12645 472 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 PBX2P40425 430 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 NKX3-2P78367 333 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 TNFAIP2Q03169 654 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 ZNF365Q70YC5 407 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 FAM126BQ8IXS8 530 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 LRRC47Q8N1G4 583 aaKnown RBP12.41□□□□□ -0.42
DDX41-211ENST00000510171 USP38Q8NB14 1042 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 GPATCH3Q96I76 525 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 GAS2L1Q99501 681 aaPredicted RBP12.41□□□□□ -0.42
DDX41-211ENST00000510171 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 PPP1R12CQ9BZL4 782 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
DDX41-211ENST00000510171 CTAGE5O15320 804 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 CNTN2Q02246 1040 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 PSRC1Q6PGN9 363 aaPredicted RBP12.4□□□□□ -0.42
DDX41-211ENST00000510171 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 CHURC1Q8WUH1 139 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 PPM1EQ8WY54 764 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 NACAP1Q9BZK3 213 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 KATNBL1Q9H079 304 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 ACAD9Q9H845 621 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 EPB41L4AQ9HCS5 686 aaPredicted RBP12.4□□□□□ -0.42
DDX41-211ENST00000510171 MSRAQ9UJ68 235 aa12.4□□□□□ -0.42
DDX41-211ENST00000510171 ISY1Q9ULR0 285 aaKnown RBP12.4□□□□□ -0.42
DDX41-211ENST00000510171 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.43
DDX41-211ENST00000510171 ASB14A6NK59 587 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 ZEB2O60315 1214 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 CABYRO75952 493 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 CD4P01730 458 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 FGBP02675 491 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 SLC3A2P08195 630 aaKnown RBP12.39□□□□□ -0.43
DDX41-211ENST00000510171 TSPY3P0CV98 308 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 TSPY8P0CW00 308 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 CYP2C18P33260 490 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 BEX3Q00994 111 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 TFAP4Q01664 338 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 PDE4BQ07343 736 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 RAB30Q15771 203 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 LRRFIP1Q32MZ4 808 aaKnown RBP12.39□□□□□ -0.43
DDX41-211ENST00000510171 TKFCQ3LXA3 575 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 CXCL17Q6UXB2 119 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 FAM160B2Q86V87 743 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 IFNL3Q8IZI9 196 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 FAM133AQ8N9E0 248 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 STAG1Q8WVM7 1258 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
DDX41-211ENST00000510171 HERVK_113Q902F9 699 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 AP5M1Q9H0R1 490 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
DDX41-211ENST00000510171 PRDM12Q9H4Q4 367 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 IL23AQ9NPF7 189 aa12.39□□□□□ -0.43
DDX41-211ENST00000510171 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
DDX41-211ENST00000510171 SOWAHBA6NEL2 793 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 M0R2C6 588 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 DYNC1LI2O43237 492 aaPredicted RBP12.38□□□□□ -0.43
DDX41-211ENST00000510171 STAT2P52630 851 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 IKQ13123 557 aaPredicted RBP12.38□□□□□ -0.43
DDX41-211ENST00000510171 ITGA7Q13683 1181 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 SLC43A3Q8NBI5 491 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 SEZ6LQ9BYH1 1024 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 HIPK3Q9H422 1215 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 A1CFQ9NQ94 594 aaKnown RBP12.38□□□□□ -0.43
DDX41-211ENST00000510171 RNF146Q9NTX7 359 aa12.38□□□□□ -0.43
DDX41-211ENST00000510171 GNEQ9Y223 722 aaKnown RBP12.38□□□□□ -0.43
DDX41-211ENST00000510171 ALAS1P13196 640 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 IGFBP4P22692 258 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 MCCP23508 829 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 SLC1A4P43007 532 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 FSCN1Q16658 493 aaKnown RBP12.37□□□□□ -0.43
DDX41-211ENST00000510171 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 IQSEC1Q6DN90 963 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 253.9 ms