RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ZBTB5O15062 677 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 LARGE1O95461 756 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 SP3Q02447 781 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 SSRP1Q08945 709 aaKnown RBP17.18■□□□□ 0.34
RNF4-213ENST00000509388 KIF22Q14807 665 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 WDR78Q5VTH9 848 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 SNRNP48Q6IEG0 339 aaKnown RBP17.18■□□□□ 0.34
RNF4-213ENST00000509388 HSCBQ8IWL3 235 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 SLC26A6Q9BXS9 759 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 R3HDMLQ9H3Y0 253 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 TXNRD2Q9NNW7 524 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 RBM27Q9P2N5 1060 aaKnown RBP17.18■□□□□ 0.34
RNF4-213ENST00000509388 MORF4L1Q9UBU8 362 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 TSKSQ9UJT2 592 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 CCPG1Q9ULG6 757 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 V9GY48 417 aaPredicted RBP17.18■□□□□ 0.34
RNF4-213ENST00000509388 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
RNF4-213ENST00000509388 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 GPR25O00155 361 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 CYTH3O43739 400 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 PEX10O60683 326 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 CNMDO75829 334 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 CD2BP2O95400 341 aaKnown RBP17.17■□□□□ 0.34
RNF4-213ENST00000509388 SLC25A27O95847 323 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 ICAM1P05362 532 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 BCRP11274 1271 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 IFNAR1P17181 557 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 COPB2P35606 906 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 QRICH1Q2TAL8 776 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 Q3C1V9 767 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 FBXO11Q86XK2 927 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 CCDC83Q8IWF9 413 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 REPS2Q8NFH8 660 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 AMNQ9BXJ7 453 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 ADGRA2Q96PE1 1338 aa17.17■□□□□ 0.34
RNF4-213ENST00000509388 ATP2A1O14983 1001 aa17.16■□□□□ 0.34
RNF4-213ENST00000509388 FKTNO75072 461 aa17.16■□□□□ 0.34
RNF4-213ENST00000509388 ECM2O94769 699 aaPredicted RBP17.16■□□□□ 0.34
RNF4-213ENST00000509388 ALAS1P13196 640 aa17.16■□□□□ 0.34
RNF4-213ENST00000509388 USH1GQ495M9 461 aa17.16■□□□□ 0.34
RNF4-213ENST00000509388 PHKBQ93100 1093 aa17.16■□□□□ 0.34
RNF4-213ENST00000509388 SNX21Q969T3 373 aa17.16■□□□□ 0.34
RNF4-213ENST00000509388 AGBL1Q96MI9 1066 aa17.16■□□□□ 0.34
RNF4-213ENST00000509388 MOV10L1Q9BXT6 1211 aaKnown RBP17.16■□□□□ 0.34
RNF4-213ENST00000509388 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
RNF4-213ENST00000509388 hCG_1642624A0A1W2PR95 340 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 PRPF3O43395 683 aaKnown RBP17.15■□□□□ 0.34
RNF4-213ENST00000509388 PPFIA3O75145 1194 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 HSPA1AP0DMV8 641 aaKnown RBP17.15■□□□□ 0.34
RNF4-213ENST00000509388 HSPA1BP0DMV9 641 aaKnown RBP17.15■□□□□ 0.34
RNF4-213ENST00000509388 MAPK4P31152 587 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 ARHGEF6Q15052 776 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 MTMR8Q96EF0 704 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 RNF26Q9BY78 433 aaPredicted RBP17.15■□□□□ 0.34
RNF4-213ENST00000509388 MROH8Q9H579 483 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 HOMER2Q9NSB8 354 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
RNF4-213ENST00000509388 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
RNF4-213ENST00000509388 FMNL1O95466 1100 aaPredicted RBP17.14■□□□□ 0.33
RNF4-213ENST00000509388 ERCC3P19447 782 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 FCGRTP55899 365 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 FUT2Q10981 343 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 NTRK3Q16288 839 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 NOM1Q5C9Z4 860 aaKnown RBP17.14■□□□□ 0.33
RNF4-213ENST00000509388 HEATR3Q7Z4Q2 680 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 ERO1AQ96HE7 468 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
RNF4-213ENST00000509388 FBXO40Q9UH90 709 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 MRPL11Q9Y3B7 192 aaKnown RBP17.14■□□□□ 0.33
RNF4-213ENST00000509388 IVNS1ABPQ9Y6Y0 642 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 ZNF536O15090 1300 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 ABCB11O95342 1321 aa17.14■□□□□ 0.33
RNF4-213ENST00000509388 TNPO2O14787 897 aaKnown RBP17.13■□□□□ 0.33
RNF4-213ENST00000509388 DEXIO95424 95 aa17.13■□□□□ 0.33
RNF4-213ENST00000509388 CTCFP49711 727 aaPredicted RBP17.13■□□□□ 0.33
RNF4-213ENST00000509388 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
RNF4-213ENST00000509388 WASF1Q92558 559 aa17.13■□□□□ 0.33
RNF4-213ENST00000509388 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
RNF4-213ENST00000509388 EFCC1Q9HA90 598 aa17.13■□□□□ 0.33
RNF4-213ENST00000509388 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
RNF4-213ENST00000509388 PTPDC1A2A3K4 754 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
RNF4-213ENST00000509388 SCG2P13521 617 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 PSMC4P43686 418 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 BECN1Q14457 450 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 KCTD2Q14681 263 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 PFKFB3Q16875 520 aaPredicted RBP17.12■□□□□ 0.33
RNF4-213ENST00000509388 PLEKHH3Q7Z736 793 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms