RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 IFNAR1P17181 557 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 MAPK4P31152 587 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 SLC16A2P36021 539 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 KIF22Q14807 665 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 ARHGEF6Q15052 776 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
HTT-204ENST00000508321 CCDC144CPQ8IYA2 1237 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 SNX21Q969T3 373 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 PAGR1Q9BTK6 254 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 RNF26Q9BY78 433 aaPredicted RBP11.88□□□□□ -0.51
HTT-204ENST00000508321 SPATC1LQ9H0A9 340 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 MROH8Q9H579 483 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 FBXO40Q9UH90 709 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 ABCB11O95342 1321 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 GPR25O00155 361 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 CNMDO75829 334 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 GNRH1P01148 92 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 STAT3P40763 770 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 AKAP17AQ02040 695 aaKnown RBP11.87□□□□□ -0.51
HTT-204ENST00000508321 FUT2Q10981 343 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 SCRN1Q12765 414 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 TMEM132BQ14DG7 1078 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 ME3Q16798 604 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 SNRNP48Q6IEG0 339 aaKnown RBP11.87□□□□□ -0.51
HTT-204ENST00000508321 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
HTT-204ENST00000508321 RAB11FIP4Q86YS3 637 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
HTT-204ENST00000508321 CHST13Q8NET6 341 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 ERO1AQ96HE7 468 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
HTT-204ENST00000508321 AMNQ9BXJ7 453 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 JMJD4Q9H9V9 463 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 TXNRD2Q9NNW7 524 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
HTT-204ENST00000508321 RBPJLQ9UBG7 517 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
HTT-204ENST00000508321 ZNF536O15090 1300 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 CYTH3O43739 400 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 CDC27P30260 824 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 FCGRTP55899 365 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 LACTBP83111 547 aaPredicted RBP11.86□□□□□ -0.51
HTT-204ENST00000508321 SP3Q02447 781 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 STK3Q13188 491 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 NTRK3Q16288 839 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 QRICH1Q2TAL8 776 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 NOL8Q76FK4 1167 aaKnown RBP11.86□□□□□ -0.51
HTT-204ENST00000508321 FBXO11Q86XK2 927 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 HSCBQ8IWL3 235 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 CCAR1Q8IX12 1150 aaKnown RBP11.86□□□□□ -0.51
HTT-204ENST00000508321 SOCS4Q8WXH5 440 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 WASF1Q92558 559 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 BTBD7Q9P203 1132 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 PFASO15067 1338 aa11.86□□□□□ -0.51
HTT-204ENST00000508321 PLXNA1Q9UIW2 1896 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 PRPF3O43395 683 aaKnown RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 STRNO43815 780 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 FKTNO75072 461 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 DEXIO95424 95 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 FMNL1O95466 1100 aaPredicted RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 TBC1D8O95759 1140 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 CTCFP49711 727 aaPredicted RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 CCT2P78371 535 aaKnown RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 HMGN5P82970 282 aaKnown RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 PLS1Q14651 629 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 SLC35G1Q2M3R5 365 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 CCDC174Q6PII3 467 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 NBPF11Q86T75 865 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 SAMD3Q8N6K7 520 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 CCDC12Q8WUD4 166 aaPredicted RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 PIGSQ96S52 555 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 MOV10L1Q9BXT6 1211 aaKnown RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 GLT8D2Q9H1C3 349 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 CPVLQ9H3G5 476 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 ACAD9Q9H845 621 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 NCOA5Q9HCD5 579 aaKnown RBP11.85□□□□□ -0.51
HTT-204ENST00000508321 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 IVNS1ABPQ9Y6Y0 642 aa11.85□□□□□ -0.51
HTT-204ENST00000508321 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 LARGE1O95461 756 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 SCG2P13521 617 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 ERCC3P19447 782 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 PRMT2P55345 433 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 SSRP1Q08945 709 aaKnown RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 CPXCR1Q8N123 301 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 TMX3Q96JJ7 454 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms