RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PFASO15067 1338 aa23.3■■□□□ 1.32
SFXN1-209ENST00000508290 TNRC18O15417 2968 aaPredicted RBP23.29■■□□□ 1.32
SFXN1-209ENST00000508290 DNAJC25-GNG10A0A024R161 153 aa23.29■■□□□ 1.32
SFXN1-209ENST00000508290 ERICH2A1L162 156 aa23.29■■□□□ 1.32
SFXN1-209ENST00000508290 CYBAP13498 195 aa23.29■■□□□ 1.32
SFXN1-209ENST00000508290 CCND3P30281 292 aaPredicted RBP23.29■■□□□ 1.32
SFXN1-209ENST00000508290 ASPRV1Q53RT3 343 aa23.29■■□□□ 1.32
SFXN1-209ENST00000508290 IFIT1BQ5T764 474 aaKnown RBP23.29■■□□□ 1.32
SFXN1-209ENST00000508290 NECAB2Q7Z6G3 386 aa23.29■■□□□ 1.32
SFXN1-209ENST00000508290 TINF2Q9BSI4 451 aa23.29■■□□□ 1.32
SFXN1-209ENST00000508290 DDX20Q9UHI6 824 aaKnown RBP23.29■■□□□ 1.32
SFXN1-209ENST00000508290 RBM8AQ9Y5S9 174 aaKnown RBP23.29■■□□□ 1.32
SFXN1-209ENST00000508290 ZNF536O15090 1300 aa23.29■■□□□ 1.32
SFXN1-209ENST00000508290 CDC45O75419 566 aa23.28■■□□□ 1.32
SFXN1-209ENST00000508290 PGK2P07205 417 aa23.28■■□□□ 1.32
SFXN1-209ENST00000508290 MTA3Q9BTC8 594 aa23.28■■□□□ 1.32
SFXN1-209ENST00000508290 RNF146Q9NTX7 359 aa23.28■■□□□ 1.32
SFXN1-209ENST00000508290 CCPG1Q9ULG6 757 aa23.28■■□□□ 1.32
SFXN1-209ENST00000508290 WDR19Q8NEZ3 1342 aa23.28■■□□□ 1.32
SFXN1-209ENST00000508290 SYNGAP1Q96PV0 1343 aa23.28■■□□□ 1.32
SFXN1-209ENST00000508290 E7EWF7 191 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 SEPT4O43236 478 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 SLC4A3P48751 1232 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 LHX8Q68G74 356 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 MAMDC4Q6UXC1 1216 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 MAF1Q9H063 256 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 GPCPD1Q9NPB8 672 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 CNPY2Q9Y2B0 182 aa23.27■■□□□ 1.32
SFXN1-209ENST00000508290 FRMPD2Q68DX3 1309 aaPredicted RBP23.27■■□□□ 1.32
SFXN1-209ENST00000508290 PDE4DIPQ5VU43 2346 aa23.26■■□□□ 1.31
SFXN1-209ENST00000508290 CNGA1P29973 690 aa23.26■■□□□ 1.31
SFXN1-209ENST00000508290 RNF20Q5VTR2 975 aa23.26■■□□□ 1.31
SFXN1-209ENST00000508290 AGBL1Q96MI9 1066 aa23.26■■□□□ 1.31
SFXN1-209ENST00000508290 TRERF1Q96PN7 1200 aa23.26■■□□□ 1.31
SFXN1-209ENST00000508290 LSG1Q9H089 658 aaKnown RBP23.26■■□□□ 1.31
SFXN1-209ENST00000508290 ALAS1P13196 640 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 SLC16A2P36021 539 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 SEC23AQ15436 765 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 TTBK2Q6IQ55 1244 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 CCDC174Q6PII3 467 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 RASGRP2Q7LDG7 609 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 CHMP4CQ96CF2 233 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 ANO2Q9NQ90 1003 aa23.25■■□□□ 1.31
SFXN1-209ENST00000508290 PARP1P09874 1014 aaKnown RBP23.24■■□□□ 1.31
SFXN1-209ENST00000508290 PAWRQ96IZ0 340 aaKnown RBP23.24■■□□□ 1.31
SFXN1-209ENST00000508290 HOMER2Q9NSB8 354 aa23.24■■□□□ 1.31
SFXN1-209ENST00000508290 POTEB2H3BUK9 544 aa23.23■■□□□ 1.31
SFXN1-209ENST00000508290 IFIT3O14879 490 aaKnown RBP23.23■■□□□ 1.31
SFXN1-209ENST00000508290 CYB5R4Q7L1T6 521 aa23.23■■□□□ 1.31
SFXN1-209ENST00000508290 ARRDC4Q8NCT1 418 aa23.23■■□□□ 1.31
SFXN1-209ENST00000508290 A1CFQ9NQ94 594 aaKnown RBP23.23■■□□□ 1.31
SFXN1-209ENST00000508290 PPP4R2Q9NY27 417 aa23.23■■□□□ 1.31
SFXN1-209ENST00000508290 NR2E3Q9Y5X4 410 aa23.23■■□□□ 1.31
SFXN1-209ENST00000508290 LOC102724159A0A0B4J2E5 919 aa23.22■■□□□ 1.31
SFXN1-209ENST00000508290 WTAPQ15007 396 aa23.22■■□□□ 1.31
SFXN1-209ENST00000508290 PWP2Q15269 919 aaKnown RBP23.22■■□□□ 1.31
SFXN1-209ENST00000508290 FAM133AQ8N9E0 248 aa23.22■■□□□ 1.31
SFXN1-209ENST00000508290 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
SFXN1-209ENST00000508290 C11orf49Q9H6J7 331 aa23.22■■□□□ 1.31
SFXN1-209ENST00000508290 ASB14A6NK59 587 aa23.21■■□□□ 1.31
SFXN1-209ENST00000508290 DNM1LO00429 736 aa23.21■■□□□ 1.31
SFXN1-209ENST00000508290 AKR1A1P14550 325 aa23.21■■□□□ 1.31
SFXN1-209ENST00000508290 NECTIN1Q15223 517 aa23.21■■□□□ 1.31
SFXN1-209ENST00000508290 TMTC2Q8N394 836 aa23.21■■□□□ 1.31
SFXN1-209ENST00000508290 DPF3Q92784 378 aa23.21■■□□□ 1.31
SFXN1-209ENST00000508290 ADD3Q9UEY8 706 aaKnown RBP23.21■■□□□ 1.31
SFXN1-209ENST00000508290 RARBP10826 455 aa23.2■■□□□ 1.3
SFXN1-209ENST00000508290 MCM5P33992 734 aa23.2■■□□□ 1.3
SFXN1-209ENST00000508290 TRAF1Q13077 416 aa23.2■■□□□ 1.3
SFXN1-209ENST00000508290 CREB3L3Q68CJ9 461 aa23.2■■□□□ 1.3
SFXN1-209ENST00000508290 STOX1Q6ZVD7 989 aa23.2■■□□□ 1.3
SFXN1-209ENST00000508290 MB21D2Q8IYB1 491 aaPredicted RBP23.2■■□□□ 1.3
SFXN1-209ENST00000508290 ABHD16BQ9H3Z7 469 aa23.2■■□□□ 1.3
SFXN1-209ENST00000508290 CYP39A1Q9NYL5 469 aa23.2■■□□□ 1.3
SFXN1-209ENST00000508290 MKI67P46013 3256 aaKnown RBP23.19■■□□□ 1.3
SFXN1-209ENST00000508290 SLC27A2O14975 620 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 GOLGA8HP0CJ92 632 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 COL6A1P12109 1028 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 MNX1P50219 401 aaPredicted RBP23.19■■□□□ 1.3
SFXN1-209ENST00000508290 TMEM67Q5HYA8 995 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 SKAP1Q86WV1 359 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 RGS22Q8NE09 1264 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 TMEM87BQ96K49 555 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 MAP3K14Q99558 947 aa23.19■■□□□ 1.3
SFXN1-209ENST00000508290 ZNF865P0CJ78 1059 aaPredicted RBP23.18■■□□□ 1.3
SFXN1-209ENST00000508290 SNAP25P60880 206 aa23.18■■□□□ 1.3
SFXN1-209ENST00000508290 CATIPQ7Z7H3 387 aa23.18■■□□□ 1.3
SFXN1-209ENST00000508290 ADGRF4Q8IZF3 695 aa23.18■■□□□ 1.3
SFXN1-209ENST00000508290 DIS3LQ8TF46 1054 aaKnown RBP23.18■■□□□ 1.3
SFXN1-209ENST00000508290 MPHOSPH6Q99547 160 aaKnown RBP23.18■■□□□ 1.3
SFXN1-209ENST00000508290 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.18■■□□□ 1.3
SFXN1-209ENST00000508290 FAM184BQ9ULE4 1060 aa23.18■■□□□ 1.3
SFXN1-209ENST00000508290 PLXNA1Q9UIW2 1896 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 ABCB11O95342 1321 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 KBTBD13C9JR72 458 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 DHX16O60231 1041 aaKnown RBP23.17■■□□□ 1.3
SFXN1-209ENST00000508290 EVI5O60447 810 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 CDC37Q16543 378 aaPredicted RBP23.17■■□□□ 1.3
SFXN1-209ENST00000508290 MUM1L1Q5H9M0 696 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 PRAMEF19Q5SWL8 479 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms