RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CPSF2Q9P2I0 782 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 FSD2A1L4K1 749 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 F8W031 263 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 H3BRJ5 948 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 RHCEP18577 417 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 CYP2C19P33261 490 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 SIK1P57059 783 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 RAC1P63000 192 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 RHDQ02161 417 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 LRRC74AQ0VAA2 488 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 SLC14A2Q15849 920 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 PLA2G4EQ3MJ16 856 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 PKN3Q6P5Z2 889 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 MFSD6Q6ZSS7 791 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 FAM47EQ6ZV65 393 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 MAP4K3Q8IVH8 894 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 CPA6Q8N4T0 437 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 CCDC138Q96M89 665 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 IFT80Q9P2H3 777 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 PIK3R4Q99570 1358 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 PDGFAP04085 211 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 SLC3A2P08195 630 aaKnown RBP8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 KRT13P13646 458 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 VWA3BQ502W6 1294 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 CFAP58Q5T655 872 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 ANKRD49Q8WVL7 239 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 EDEM1Q92611 657 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 GMCL1Q96IK5 515 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 JAKMIP1Q96N16 626 aaKnown RBP8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 ESF1Q9H501 851 aaKnown RBP8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 STARD7Q9NQZ5 370 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 GPR34Q9UPC5 381 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 SUPT16HQ9Y5B9 1047 aaKnown RBP8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 EPN1Q9Y6I3 576 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 IL16Q14005 1332 aa8.54□□□□□ -1.04
PDGFRA-206ENST00000508170 A6NNZ2 444 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 SNUPNO95149 360 aaKnown RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 CYP17A1P05093 508 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 TNNT3P45378 269 aaPredicted RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 SETMARQ53H47 684 aaPredicted RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 NXPE4Q6UWF7 544 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 C6orf15Q6UXA7 325 aaPredicted RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 C7orf31Q8N865 590 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 MPHOSPH8Q99549 860 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 ADPGKQ9BRR6 497 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 SPTLC2O15270 562 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 GREM1O60565 184 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 CPNE3O75131 537 aaKnown RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 MT-ND3P03897 115 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 SFTPCP11686 197 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 L1CAMP32004 1257 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 IL6STP40189 918 aaPredicted RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 MEA1Q16626 185 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 CCDC149Q6ZUS6 474 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 VSIG1Q86XK7 387 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 CBARPQ8N350 705 aaPredicted RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 PPM1KQ8N3J5 372 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 TRIML1Q8N9V2 468 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 PTCD2Q8WV60 388 aaKnown RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 RHOVQ96L33 236 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 SLC26A8Q96RN1 970 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 GPATCH1Q9BRR8 931 aaKnown RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 NUCKS1Q9H1E3 243 aaKnown RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 SUCOQ9UBS9 1254 aaKnown RBP8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 C2CD2Q9Y426 696 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 SYNJ1O43426 1573 aa8.53□□□□□ -1.04
PDGFRA-206ENST00000508170 B4E171 279 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 PLOD2O00469 737 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 DDX58O95786 925 aaKnown RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 TERF2Q15554 542 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 CEP68Q76N32 757 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 TAX1BP1Q86VP1 789 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 ANKRD18AQ8IVF6 992 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 ASIC4Q96FT7 647 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 AGTPBP1Q9UPW5 1226 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 DNM3Q9UQ16 869 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 MTF2Q9Y483 593 aaPredicted RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 KIF21BO75037 1637 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 INO80B-WBP1J3KQ70 363 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 APBB3O95704 486 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 TBX18O95935 607 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 TPM3P06753 285 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 MCM4P33991 863 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 NPTX2P47972 431 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 PCBP1Q15365 356 aaKnown RBP eCLIP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 RABL6Q3YEC7 729 aaPredicted RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 C10orf76Q5T2E6 689 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 FOXB2Q5VYV0 432 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 FBXW10Q5XX13 1052 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 FAM205BPQ63HN1 556 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 CHST15Q7LFX5 561 aaPredicted RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 ZBTB38Q8NAP3 1195 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms