RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TRAPPC10P48553 1259 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 MEA1Q16626 185 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 PFKFB3Q16875 520 aaPredicted RBP15.04■□□□□ -0
SNCAIP-209ENST00000508017 TSR1Q2NL82 804 aaKnown RBP15.04■□□□□ -0
SNCAIP-209ENST00000508017 MAP9Q49MG5 647 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 PACS2Q86VP3 889 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 GPKOWQ92917 476 aaPredicted RBP eCLIP15.04■□□□□ -0
SNCAIP-209ENST00000508017 TTYH3Q9C0H2 523 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 TARSL2A2RTX5 802 aaKnown RBP15.04■□□□□ -0
SNCAIP-209ENST00000508017 NKRFO15226 690 aaKnown RBP eCLIP15.04■□□□□ -0
SNCAIP-209ENST00000508017 EEF1GP26641 437 aaKnown RBP15.04■□□□□ -0
SNCAIP-209ENST00000508017 MAGEA9P43362 315 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 SMCR8Q8TEV9 937 aaPredicted RBP15.04■□□□□ -0
SNCAIP-209ENST00000508017 NHEJ1Q9H9Q4 299 aaPredicted RBP15.04■□□□□ -0
SNCAIP-209ENST00000508017 COL22A1Q8NFW1 1626 aaPredicted RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 KRT86O43790 486 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 PPFIA4O75335 1185 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 SRGNP10124 158 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 EIF5P55010 431 aaKnown RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 KRT83P78385 493 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 CKAP4Q07065 602 aaKnown RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 TTI2Q6NXR4 508 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 CCNI2Q6ZMN8 369 aaPredicted RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 RASSF8Q8NHQ8 419 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 DUSP9Q99956 384 aaKnown RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 TMEM60Q9H2L4 133 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 THAP9Q9H5L6 903 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 BCL9O00512 1426 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 FGRP09769 529 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 IDEP14735 1019 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 TRIM21P19474 475 aaKnown RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 MCM3P25205 808 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 CORO7P57737 925 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 MRPS25P82663 173 aaKnown RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 EZH2Q15910 746 aaKnown RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 ARL6IP4Q66PJ3 421 aaKnown RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 SMARCC1Q92922 1105 aaPredicted RBP15.03■□□□□ -0
SNCAIP-209ENST00000508017 TUBGCP2Q9BSJ2 902 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 BRIP1Q9BX63 1249 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 EXOC1Q9NV70 894 aa15.03■□□□□ -0
SNCAIP-209ENST00000508017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.03■□□□□ -0
SNCAIP-209ENST00000508017 ABCA3Q99758 1704 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 TAF1P21675 1872 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 CYP2D6P10635 497 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 CYLC1P35663 651 aaPredicted RBP15.02■□□□□ -0
SNCAIP-209ENST00000508017 DNM2P50570 870 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 SLC4A8Q2Y0W8 1093 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 CCDC152Q4G0S7 254 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 KRT26Q7Z3Y9 468 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 IPO4Q8TEX9 1081 aaKnown RBP15.02■□□□□ -0
SNCAIP-209ENST00000508017 CRACR2AQ9BSW2 395 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 JADE2Q9NQC1 790 aa15.02■□□□□ -0
SNCAIP-209ENST00000508017 MAGEC2Q9UBF1 373 aaPredicted RBP15.02■□□□□ -0
SNCAIP-209ENST00000508017 MYH10P35580 1976 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 ZNF804BA4D1E1 1349 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 PSMA7O14818 248 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 ZNF263O14978 683 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 PLEKP08567 350 aaPredicted RBP15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 TYW1BQ6NUM6 668 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 ZNF662Q6ZS27 426 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 GPIHBP1Q8IV16 184 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 BLIDQ8IZY5 108 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 GIMAP8Q8ND71 665 aaPredicted RBP15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 HDAC7Q8WUI4 952 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 RPGRIP1Q96KN7 1286 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 EFCC1Q9HA90 598 aa15.02□□□□□ -0.01
SNCAIP-209ENST00000508017 PHLPP1O60346 1717 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 KCNB1Q14721 858 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 TTC31Q49AM3 519 aaPredicted RBP15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 CSGALNACT2Q8N6G5 542 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 EHBP1Q8NDI1 1231 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 DRC1Q96MC2 740 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 PCMTD1Q96MG8 357 aaPredicted RBP15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 EHD4Q9H223 541 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 LRWD1Q9UFC0 647 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 MYH1P12882 1939 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 TBC1D8BQ0IIM8 1120 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 DTHD1Q6ZMT9 781 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 RRP36Q96EU6 259 aaKnown RBP15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 PURBQ96QR8 312 aaKnown RBP15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 KAT14Q9H8E8 782 aa15.01□□□□□ -0.01
SNCAIP-209ENST00000508017 RHOBTB3O94955 611 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 AENQ8WTP8 325 aaKnown RBP15□□□□□ -0.01
SNCAIP-209ENST00000508017 CNOT6LQ96LI5 555 aaKnown RBP15□□□□□ -0.01
SNCAIP-209ENST00000508017 RABEP2Q9H5N1 569 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 ZNHIT6Q9NWK9 470 aaKnown RBP15□□□□□ -0.01
SNCAIP-209ENST00000508017 CAPN6Q9Y6Q1 641 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 ZBED6P86452 979 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 ANKRD40Q6AI12 368 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 RCSD1Q6JBY9 416 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 CREG2Q8IUH2 290 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
SNCAIP-209ENST00000508017 MLXIPQ9HAP2 919 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 KBTBD4Q9NVX7 518 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 SMARCAL1Q9NZC9 954 aa15□□□□□ -0.01
SNCAIP-209ENST00000508017 DMGDHQ9UI17 866 aaKnown RBP15□□□□□ -0.01
SNCAIP-209ENST00000508017 ANO9A1A5B4 782 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 GOLGA6BA6NDN3 693 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 SHOX2O60902 331 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms