RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 CGNQ9P2M7 1197 aaKnown RBP24.84■■□□□ 1.57
SPCS3-203ENST00000507678 SLF2Q8IX21 1173 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 LRRC15Q8TF66 581 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 COA7Q96BR5 231 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 WDR24Q96S15 920 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 PYM1Q9BRP8 204 aaKnown RBP24.83■■□□□ 1.57
SPCS3-203ENST00000507678 QTRT2Q9H974 415 aaKnown RBP24.83■■□□□ 1.57
SPCS3-203ENST00000507678 LZTFL1Q9NQ48 299 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.83■■□□□ 1.57
SPCS3-203ENST00000507678 A0A0U1RQJ8 604 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 RAD21O60216 631 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 HSPA1LP34931 641 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 DPP8Q6V1X1 898 aaPredicted RBP24.83■■□□□ 1.57
SPCS3-203ENST00000507678 TBC1D22AQ8WUA7 517 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 ATRIPQ8WXE1 791 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 CTAGE1Q96RT6 745 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 IRX2Q9BZI1 471 aaPredicted RBP24.83■■□□□ 1.57
SPCS3-203ENST00000507678 TMEM51Q9NW97 253 aa24.83■■□□□ 1.57
SPCS3-203ENST00000507678 TECP42680 631 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 NONOQ15233 471 aaKnown RBP eCLIP24.82■■□□□ 1.56
SPCS3-203ENST00000507678 SPZ1Q9BXG8 430 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 ZMYND12Q9H0C1 365 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 L2HGDHQ9H9P8 463 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 C6orf50Q9HD87 102 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 TTF2Q9UNY4 1162 aaKnown RBP24.82■■□□□ 1.56
SPCS3-203ENST00000507678 AKR1B1P15121 316 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 KMT5BQ4FZB7 885 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 TBCKQ8TEA7 893 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 DDX4Q9NQI0 724 aaKnown RBP24.82■■□□□ 1.56
SPCS3-203ENST00000507678 RMND1Q9NWS8 449 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 RWDD2AQ9UIY3 292 aa24.82■■□□□ 1.56
SPCS3-203ENST00000507678 FXR1P51114 621 aaKnown RBP eCLIP24.81■■□□□ 1.56
SPCS3-203ENST00000507678 TXNRD1Q16881 649 aa24.81■■□□□ 1.56
SPCS3-203ENST00000507678 LZTS2Q9BRK4 669 aa24.81■■□□□ 1.56
SPCS3-203ENST00000507678 DDX60LQ5H9U9 1706 aaKnown RBP24.81■■□□□ 1.56
SPCS3-203ENST00000507678 KCNJ18B7U540 433 aa24.81■■□□□ 1.56
SPCS3-203ENST00000507678 PMS1P54277 932 aaKnown RBP24.81■■□□□ 1.56
SPCS3-203ENST00000507678 KCNJ12Q14500 433 aa24.81■■□□□ 1.56
SPCS3-203ENST00000507678 FBXO38Q6PIJ6 1188 aa24.81■■□□□ 1.56
SPCS3-203ENST00000507678 CERS5Q8N5B7 392 aa24.81■■□□□ 1.56
SPCS3-203ENST00000507678 DAGLBQ8NCG7 672 aa24.81■■□□□ 1.56
SPCS3-203ENST00000507678 ZC3H12CQ9C0D7 883 aaKnown RBP24.81■■□□□ 1.56
SPCS3-203ENST00000507678 MRPL44Q9H9J2 332 aaKnown RBP24.81■■□□□ 1.56
SPCS3-203ENST00000507678 G3V3G9 751 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 PLCG1P19174 1290 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 CT47A1Q5JQC4 288 aaPredicted RBP24.8■■□□□ 1.56
SPCS3-203ENST00000507678 DCAF8Q5TAQ9 597 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 RAD9BQ6WBX8 426 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 FCHSD1Q86WN1 690 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 PHLPP2Q6ZVD8 1323 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 MPHOSPH10O00566 681 aaKnown RBP24.8■■□□□ 1.56
SPCS3-203ENST00000507678 GYPCP04921 128 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 CCDC93Q567U6 631 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 GALNT17Q6IS24 598 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 CABP7Q86V35 215 aa24.8■■□□□ 1.56
SPCS3-203ENST00000507678 CCDC12Q8WUD4 166 aaPredicted RBP24.8■■□□□ 1.56
SPCS3-203ENST00000507678 GAKO14976 1311 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 OR52Z1P0C646 297 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 CERS3Q8IU89 383 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 PDHBP11177 359 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 GNA11P29992 359 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 HOXA10P31260 410 aaPredicted RBP24.79■■□□□ 1.56
SPCS3-203ENST00000507678 CASQ1P31415 396 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 TXKP42681 527 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 COPB1P53618 953 aaKnown RBP24.79■■□□□ 1.56
SPCS3-203ENST00000507678 TCP11X2Q5H9J9 407 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 POTEDQ86YR6 584 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 MNS1Q8NEH6 495 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 NUP88Q99567 741 aaPredicted RBP24.79■■□□□ 1.56
SPCS3-203ENST00000507678 CARD6Q9BX69 1037 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 KRT25Q7Z3Z0 450 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 NEK8Q86SG6 692 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 REXO1Q8N1G1 1221 aaKnown RBP24.79■■□□□ 1.56
SPCS3-203ENST00000507678 UIMC1Q96RL1 719 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 CRAMP1Q96RY5 1269 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 USP40Q9NVE5 1235 aa24.79■■□□□ 1.56
SPCS3-203ENST00000507678 ZBTB22O15209 634 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 ONECUT3O60422 494 aaPredicted RBP24.78■■□□□ 1.56
SPCS3-203ENST00000507678 MFAP3LO75121 409 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 PBX1P40424 430 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 FAM163AQ96GL9 167 aaPredicted RBP24.78■■□□□ 1.56
SPCS3-203ENST00000507678 ZNF219Q9P2Y4 722 aaPredicted RBP24.78■■□□□ 1.56
SPCS3-203ENST00000507678 UBR3Q6ZT12 1888 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 CDK5RAP2Q96SN8 1893 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 RNF225M0QZC1 329 aaPredicted RBP24.78■■□□□ 1.56
SPCS3-203ENST00000507678 UBXN1Q04323 297 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 ANKRD20A12PQ8NF67 263 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 MTMR4Q9NYA4 1195 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 PARP3Q9Y6F1 533 aa24.78■■□□□ 1.56
SPCS3-203ENST00000507678 PROM2Q8N271 834 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 ZNF397Q8NF99 534 aaPredicted RBP24.77■■□□□ 1.56
SPCS3-203ENST00000507678 TRIM47Q96LD4 638 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 PANX2Q96RD6 677 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 MYH1P12882 1939 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 VGLL3A8MV65 326 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 CCDC175P0C221 793 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 SLC16A2P36021 539 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 CACNB3P54284 484 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 HPS3Q969F9 1004 aa24.77■■□□□ 1.56
SPCS3-203ENST00000507678 TPM1P09493 284 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms