RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 CNPY2Q9Y2B0 182 aa9.55□□□□□ -0.88
CLDND1-214ENST00000507411 MYH2Q9UKX2 1941 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 NAV2Q8IVL1 2488 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 A0A1B0GUL7 405 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-214ENST00000507411 MBTPS2O43462 519 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 ZYXQ15942 572 aaKnown RBP9.54□□□□□ -0.88
CLDND1-214ENST00000507411 CCDC30Q5VVM6 783 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 CATSPERGQ6ZRH7 1159 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 SHCBP1Q8NEM2 672 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-214ENST00000507411 AGBL1Q96MI9 1066 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 FEZ1Q99689 392 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
CLDND1-214ENST00000507411 FAM184BQ9ULE4 1060 aa9.54□□□□□ -0.88
CLDND1-214ENST00000507411 SOBPA7XYQ1 873 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 DUSP11O75319 330 aaKnown RBP9.53□□□□□ -0.88
CLDND1-214ENST00000507411 KCNJ6P48051 423 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 RSPO4Q2I0M5 234 aaPredicted RBP9.53□□□□□ -0.88
CLDND1-214ENST00000507411 TCEAL5Q5H9L2 206 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 METTL24Q5JXM2 366 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 SPATC1LQ9H0A9 340 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 TRPV6Q9H1D0 765 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 MROH8Q9H579 483 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 SIP14410 1827 aa9.53□□□□□ -0.88
CLDND1-214ENST00000507411 PDGFBP01127 241 aaPredicted RBP9.52□□□□□ -0.89
CLDND1-214ENST00000507411 IFIT1P09914 478 aaKnown RBP9.52□□□□□ -0.89
CLDND1-214ENST00000507411 FCER1AP12319 257 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 BTDP43251 543 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 JAG1P78504 1218 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 DMWDQ09019 674 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 SMAD4Q13485 552 aaKnown RBP9.52□□□□□ -0.89
CLDND1-214ENST00000507411 COL19A1Q14993 1142 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 RPAINQ86UA6 219 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 NCAPG2Q86XI2 1143 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 C12orf42Q96LP6 360 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 LARP6Q9BRS8 491 aaKnown RBP9.52□□□□□ -0.89
CLDND1-214ENST00000507411 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.89
CLDND1-214ENST00000507411 GINM1Q9NU53 330 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 KIF16BQ96L93 1317 aa9.52□□□□□ -0.89
CLDND1-214ENST00000507411 SCN5AQ14524 2016 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 LINC01553A4QN01 128 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 NCK2O43639 380 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 B4GALT4O60513 344 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 GDF11O95390 407 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 LMNAP02545 664 aaKnown RBP9.51□□□□□ -0.89
CLDND1-214ENST00000507411 VCAM1P19320 739 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 DZIP1Q86YF9 867 aaKnown RBP9.51□□□□□ -0.89
CLDND1-214ENST00000507411 SLF2Q8IX21 1173 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 TMEM105Q8N8V8 129 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 LINS1Q8NG48 757 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 DDX27Q96GQ7 796 aaKnown RBP9.51□□□□□ -0.89
CLDND1-214ENST00000507411 RIPOR3Q96MK2 946 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 NSUN3Q9H649 340 aaKnown RBP9.51□□□□□ -0.89
CLDND1-214ENST00000507411 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 ZBTB21Q9ULJ3 1066 aa9.51□□□□□ -0.89
CLDND1-214ENST00000507411 COL11A1P12107 1806 aaPredicted RBP9.51□□□□□ -0.89
CLDND1-214ENST00000507411 ZNFX1Q9P2E3 1918 aaKnown RBP9.5□□□□□ -0.89
CLDND1-214ENST00000507411 OTOGLQ3ZCN5 2332 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 BAIAP3O94812 1187 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 PDE8BO95263 885 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 PGK2P07205 417 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 RFC2P35250 354 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 LTBRP36941 435 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 USP14P54578 494 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 ITGA7Q13683 1181 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 PLS1Q14651 629 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-214ENST00000507411 TMCO2Q7Z6W1 182 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-214ENST00000507411 RAD9AQ99638 391 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 SEZ6LQ9BYH1 1024 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 UPF3AQ9H1J1 476 aaKnown RBP9.5□□□□□ -0.89
CLDND1-214ENST00000507411 ZHX1Q9UKY1 873 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-214ENST00000507411 TNKSO95271 1327 aa9.5□□□□□ -0.89
CLDND1-214ENST00000507411 LOC730098B7Z3J9 87 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 CABYRO75952 493 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 SDHBP21912 280 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 GJA9P57773 515 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 LSM11P83369 360 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLDND1-214ENST00000507411 PPP4R3BQ5MIZ7 849 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 CXCL17Q6UXB2 119 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 MMP19Q99542 508 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 TRIM34Q9BYJ4 488 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 SIL1Q9H173 461 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 SEMA4AQ9H3S1 761 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 RPAP3Q9H6T3 665 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-214ENST00000507411 PI4KBQ9UBF8 816 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 CD207Q9UJ71 328 aa9.49□□□□□ -0.89
CLDND1-214ENST00000507411 DIS3Q9Y2L1 958 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms