RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PRAMEF19Q5SWL8 479 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
NR1I3-222ENST00000506018 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
NR1I3-222ENST00000506018 DCAF4Q8WV16 495 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 ACAD9Q9H845 621 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 XPNPEP3Q9NQH7 507 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 TCP11L1Q9NUJ3 509 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 ZNF213O14771 459 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
NR1I3-222ENST00000506018 SYN1P17600 705 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 LRRC26Q2I0M4 334 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 CCDC178Q5BJE1 867 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 AKNAD1Q5T1N1 836 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 ANO1Q5XXA6 986 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 CWC27Q6UX04 472 aaKnown RBP12.28□□□□□ -0.44
NR1I3-222ENST00000506018 KCTD1Q719H9 257 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
NR1I3-222ENST00000506018 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-222ENST00000506018 ESR2Q92731 530 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 LBHD1Q9BQE6 289 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-222ENST00000506018 PRO3102Q9H379 93 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 IL17RBQ9NRM6 502 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 HOMER2Q9NSB8 354 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 PNMA2Q9UL42 364 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 FAM184BQ9ULE4 1060 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 MTMR7Q9Y216 660 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 RIPK3Q9Y572 518 aa12.28□□□□□ -0.44
NR1I3-222ENST00000506018 NMT2O60551 498 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.45
NR1I3-222ENST00000506018 HAND2P61296 217 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 MAMDC4Q6UXC1 1216 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 TTC14Q96N46 770 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 GDF15Q99988 308 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 SPC25Q9HBM1 224 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 INCENPQ9NQS7 918 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 RNF146Q9NTX7 359 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 CTNNA3Q9UI47 895 aa12.27□□□□□ -0.45
NR1I3-222ENST00000506018 ZHX1Q9UKY1 873 aaPredicted RBP12.27□□□□□ -0.45
NR1I3-222ENST00000506018 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 ALAS1P13196 640 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 MAGEA10P43363 369 aaPredicted RBP12.26□□□□□ -0.45
NR1I3-222ENST00000506018 LRRC41Q15345 812 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 IMMTQ16891 758 aaKnown RBP12.26□□□□□ -0.45
NR1I3-222ENST00000506018 IQCA1Q86XH1 822 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 TRERF1Q96PN7 1200 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 UBE2OQ9C0C9 1292 aaKnown RBP12.26□□□□□ -0.45
NR1I3-222ENST00000506018 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
NR1I3-222ENST00000506018 MYH6P13533 1939 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 ASB14A6NK59 587 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 ZNF865P0CJ78 1059 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-222ENST00000506018 ADCYAP1R1P41586 468 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 NOVP48745 357 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 RTP1P59025 263 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 CCDC174Q6PII3 467 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 RUFY2Q8WXA3 655 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 TMEM47Q9BQJ4 181 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 DSCC1Q9BVC3 393 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-222ENST00000506018 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 ATP11BQ9Y2G3 1177 aa12.25□□□□□ -0.45
NR1I3-222ENST00000506018 ICAM1P05362 532 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 ACVR2BQ13705 512 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 SYDE2Q5VT97 1194 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 TDHQ8IZJ6 230 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 MPHOSPH6Q99547 160 aaKnown RBP12.24□□□□□ -0.45
NR1I3-222ENST00000506018 TSEN34Q9BSV6 310 aaKnown RBP12.24□□□□□ -0.45
NR1I3-222ENST00000506018 CNNM2Q9H8M5 875 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 PHF24Q9UPV7 400 aa12.24□□□□□ -0.45
NR1I3-222ENST00000506018 ZNF536O15090 1300 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 DUSP11O75319 330 aaKnown RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 PGK1P00558 417 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 C1orf53Q5VUE5 145 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 BTNL9Q6UXG8 535 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 DGKHQ86XP1 1220 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 PCSK9Q8NBP7 692 aaKnown RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 FERMT2Q96AC1 680 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 KRT23Q9C075 422 aa12.23□□□□□ -0.45
NR1I3-222ENST00000506018 RANBP17Q9H2T7 1088 aaKnown RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 PRDM5Q9NQX1 630 aaPredicted RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 ADD3Q9UEY8 706 aaKnown RBP12.23□□□□□ -0.45
NR1I3-222ENST00000506018 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-222ENST00000506018 RAD50Q92878 1312 aa12.22□□□□□ -0.45
NR1I3-222ENST00000506018 SNAI1O95863 264 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-222ENST00000506018 PDHBP11177 359 aa12.22□□□□□ -0.45
NR1I3-222ENST00000506018 MDM2Q00987 491 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-222ENST00000506018 SNX17Q15036 470 aa12.22□□□□□ -0.45
NR1I3-222ENST00000506018 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms