RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
NIPBL-205ENST00000505998 ZNF227Q86WZ6 799 aa8.59□□□□□ -1.03
NIPBL-205ENST00000505998 SLC12A9Q9BXP2 914 aa8.59□□□□□ -1.03
NIPBL-205ENST00000505998 ADAMTS10Q9H324 1103 aa8.59□□□□□ -1.03
NIPBL-205ENST00000505998 TMEM82A0PJX8 343 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 IQCA1LA6NCM1 817 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 GSTM1P09488 218 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 IFRD2Q12894 506 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-205ENST00000505998 DUSP4Q13115 394 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 RASA3Q14644 834 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 MTERF2Q49AM1 385 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 TRIM59Q8IWR1 403 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 MRGPRX3Q96LB0 322 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 FCRL3Q96P31 734 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-205ENST00000505998 LGR4Q9BXB1 951 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 ZSWIM4Q9H7M6 989 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 AP5S1Q9NUS5 200 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 SNTG2Q9NY99 539 aa8.58□□□□□ -1.04
NIPBL-205ENST00000505998 HK2P52789 917 aa8.57□□□□□ -1.04
NIPBL-205ENST00000505998 BMS1Q14692 1282 aaKnown RBP8.57□□□□□ -1.04
NIPBL-205ENST00000505998 NFE2L2Q16236 605 aa8.57□□□□□ -1.04
NIPBL-205ENST00000505998 CCDC144BQ3MJ40 725 aa8.57□□□□□ -1.04
NIPBL-205ENST00000505998 ZPBP2Q6X784 338 aa8.57□□□□□ -1.04
NIPBL-205ENST00000505998 DPH6Q7L8W6 267 aa8.57□□□□□ -1.04
NIPBL-205ENST00000505998 ZNF669Q96BR6 464 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-205ENST00000505998 GPR55Q9Y2T6 319 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-205ENST00000505998 ZNF281Q9Y2X9 895 aa8.57□□□□□ -1.04
NIPBL-205ENST00000505998 FAM221BA6H8Z2 402 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 STXBP3O00186 592 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 ZGLP1P0C6A0 271 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 IFNGR1P15260 489 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 GDNFP39905 211 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 RTP2Q5QGT7 225 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 GTF2IRD2BQ6EKJ0 949 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 GTF2IRD2Q86UP8 949 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 NAT16Q8N8M0 369 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 BTN2A2Q8WVV5 523 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
NIPBL-205ENST00000505998 FCRL2Q96LA5 508 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-205ENST00000505998 AURKAO14965 403 aa8.55□□□□□ -1.04
NIPBL-205ENST00000505998 SPATC1Q76KD6 591 aa8.55□□□□□ -1.04
NIPBL-205ENST00000505998 LRRC47Q8N1G4 583 aaKnown RBP8.55□□□□□ -1.04
NIPBL-205ENST00000505998 MCMBPQ9BTE3 642 aa8.55□□□□□ -1.04
NIPBL-205ENST00000505998 CWC22Q9HCG8 908 aaKnown RBP8.55□□□□□ -1.04
NIPBL-205ENST00000505998 PFDN2Q9UHV9 154 aa8.55□□□□□ -1.04
NIPBL-205ENST00000505998 CDK11AQ9UQ88 783 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-205ENST00000505998 BACE2Q9Y5Z0 518 aa8.55□□□□□ -1.04
NIPBL-205ENST00000505998 A0A1W2PQU0 124 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 C2orf71A6NGG8 1288 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 TBX1O43435 398 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 OXR1Q8N573 874 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 PDZD8Q8NEN9 1154 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 LINC01599Q8WXQ3 324 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 MRFAP1L1Q96HT8 127 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 MAP6Q96JE9 813 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 ADGRE2Q9UHX3 823 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 CTNND2Q9UQB3 1225 aa8.54□□□□□ -1.04
NIPBL-205ENST00000505998 RAC2P15153 192 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 SEPHS1P49903 392 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 PPP2R2AP63151 447 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 SSRP1Q08945 709 aaKnown RBP8.53□□□□□ -1.04
NIPBL-205ENST00000505998 HSP90AA2PQ14568 343 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-205ENST00000505998 RCSD1Q6JBY9 416 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 CBLL1Q75N03 491 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 SPPL2CQ8IUH8 684 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 KSR1Q8IVT5 923 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 ANKS4BQ8N8V4 417 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 SPATA9Q9BWV2 254 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 NKX2-4Q9H2Z4 354 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 CYP26B1Q9NR63 512 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 C19orf73Q9NVV2 129 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 ERVK13-1Q9NX77 482 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 TNFRSF10DQ9UBN6 386 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 EBF1Q9UH73 591 aa8.53□□□□□ -1.04
NIPBL-205ENST00000505998 FGF10O15520 208 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-205ENST00000505998 HOXC12P31275 282 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 KIR2DL1P43626 348 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-205ENST00000505998 KIR2DL2P43627 348 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-205ENST00000505998 IRAK1P51617 712 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 CHRNEQ04844 493 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 SCRN1Q12765 414 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 EEF1DP3Q658K8 133 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 CYP2R1Q6VVX0 501 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 DNAJC7Q99615 494 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 EIF4G1Q04637 1599 aaKnown RBP8.52□□□□□ -1.05
NIPBL-205ENST00000505998 KDM2BQ8NHM5 1336 aa8.52□□□□□ -1.05
NIPBL-205ENST00000505998 FITM1A5D6W6 292 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-205ENST00000505998 SNRPB2P08579 225 aaKnown RBP8.51□□□□□ -1.05
NIPBL-205ENST00000505998 AFMP43652 599 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 CEP128Q6ZU80 1094 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 FLAD1Q8NFF5 587 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 HHIPL1Q96JK4 782 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 PTCHD1Q96NR3 888 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 AARSD1Q9BTE6 412 aaKnown RBP8.51□□□□□ -1.05
NIPBL-205ENST00000505998 PEG3Q9GZU2 1588 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
NIPBL-205ENST00000505998 BIN1O00499 593 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms