RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 COL11A1P12107 1806 aaPredicted RBP8.68□□□□□ -1.02
VCAN-206ENST00000505615 MCM3APO60318 1980 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 A0A1W2PQ45 241 aaPredicted RBP8.67□□□□□ -1.02
VCAN-206ENST00000505615 A0A1W2PQY0 241 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 COBLO75128 1261 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 GDF11O95390 407 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 MRE11P49959 708 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 PRAMEF19Q5SWL8 479 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 CCDC102BQ68D86 513 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 USP17L2Q6R6M4 530 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 CCDC129Q6ZRS4 1044 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 ANKRD33Q7Z3H0 272 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 ROBO3Q96MS0 1386 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 NKX2-4Q9H2Z4 354 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 TMEM39AQ9NV64 488 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 ABCF2Q9UG63 623 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 YBX2Q9Y2T7 364 aaKnown RBP8.67□□□□□ -1.02
VCAN-206ENST00000505615 IVNS1ABPQ9Y6Y0 642 aa8.67□□□□□ -1.02
VCAN-206ENST00000505615 TRIOO75962 3097 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 ERC2O15083 957 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 MAP4K4O95819 1239 aaPredicted RBP8.66□□□□□ -1.02
VCAN-206ENST00000505615 TIMP1P01033 207 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 JUNDP17535 347 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 ADORA2AP29274 412 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 PPIGQ13427 754 aaKnown RBP eCLIP8.66□□□□□ -1.02
VCAN-206ENST00000505615 RAB30Q15771 203 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 CATSPERGQ6ZRH7 1159 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 SLC44A5Q8NCS7 719 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 TOX2Q96NM4 488 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 GINM1Q9NU53 330 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 PI4KBQ9UBF8 816 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 PTPRZ1P23471 2315 aaPredicted RBP8.66□□□□□ -1.02
VCAN-206ENST00000505615 USP34Q70CQ2 3546 aa8.66□□□□□ -1.02
VCAN-206ENST00000505615 SIAH2O43255 324 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 CIAO1O76071 339 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 PGK1P00558 417 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 VCAM1P19320 739 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
VCAN-206ENST00000505615 AAK1Q2M2I8 961 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 SPTY2D1Q68D10 685 aaPredicted RBP8.65□□□□□ -1.02
VCAN-206ENST00000505615 MFSD5Q6N075 450 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 ZNF365Q70YC5 407 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 MICALL1Q8N3F8 863 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 NSUN4Q96CB9 384 aaKnown RBP8.65□□□□□ -1.02
VCAN-206ENST00000505615 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 SIL1Q9H173 461 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 XPNPEP3Q9NQH7 507 aa8.65□□□□□ -1.02
VCAN-206ENST00000505615 COL4A4P53420 1690 aaPredicted RBP8.65□□□□□ -1.03
VCAN-206ENST00000505615 RIF1Q5UIP0 2472 aaKnown RBP8.64□□□□□ -1.03
VCAN-206ENST00000505615 ADAMTS4O75173 837 aa8.64□□□□□ -1.03
VCAN-206ENST00000505615 CSF2RAP15509 400 aa8.64□□□□□ -1.03
VCAN-206ENST00000505615 ZYXQ15942 572 aaKnown RBP8.64□□□□□ -1.03
VCAN-206ENST00000505615 DPP9Q86TI2 863 aa8.64□□□□□ -1.03
VCAN-206ENST00000505615 SH3RF3Q8TEJ3 882 aaPredicted RBP8.64□□□□□ -1.03
VCAN-206ENST00000505615 HERVK_113Q902F9 699 aa8.64□□□□□ -1.03
VCAN-206ENST00000505615 LENG1Q96BZ8 264 aaPredicted RBP8.64□□□□□ -1.03
VCAN-206ENST00000505615 MOV10L1Q9BXT6 1211 aaKnown RBP8.64□□□□□ -1.03
VCAN-206ENST00000505615 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
VCAN-206ENST00000505615 PRKRIP1Q9H875 184 aaPredicted RBP8.64□□□□□ -1.03
VCAN-206ENST00000505615 CD320Q9NPF0 282 aa8.64□□□□□ -1.03
VCAN-206ENST00000505615 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
VCAN-206ENST00000505615 MSRAQ9UJ68 235 aa8.64□□□□□ -1.03
VCAN-206ENST00000505615 FLT1P17948 1338 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 DCDC2CA8MYV0 355 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 PI4K2BG5E9Z4 385 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 SMIM22K7EJ46 135 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 STRNO43815 780 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 GH2P01242 217 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 ACRP10323 421 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 RARBP10826 455 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 POU3F3P20264 500 aaPredicted RBP8.63□□□□□ -1.03
VCAN-206ENST00000505615 NHLH1Q02575 133 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 PSRC1Q6PGN9 363 aaPredicted RBP8.63□□□□□ -1.03
VCAN-206ENST00000505615 PI16Q6UXB8 463 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 TRIM46Q7Z4K8 759 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 SHCBP1Q8NEM2 672 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 ACER1Q8TDN7 264 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 MAML3Q96JK9 1138 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 KIAA1683Q9H0B3 1180 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 SLC28A3Q9HAS3 691 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 MTCH2Q9Y6C9 303 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 TET1Q8NFU7 2136 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 CACNA1BQ00975 2339 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 SCN5AQ14524 2016 aa8.63□□□□□ -1.03
VCAN-206ENST00000505615 ZNF521Q96K83 1311 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 FAM186AA6NE01 2351 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 LDHCP07864 332 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 MYOGP15173 224 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 TAL1P17542 331 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms