RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
USP17L28-201ENST00000504543 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 RABGAP1Q9Y3P9 1069 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 DTNBO60941 627 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 DDAH1O94760 285 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 SNHG28P0DPA3 235 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 CDC27P30260 824 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 PRMT2P55345 433 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 RTN1Q16799 776 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 FOXD4L6Q3SYB3 417 aaPredicted RBP11.78□□□□□ -0.52
USP17L28-201ENST00000504543 FOXD4L3Q6VB84 417 aaPredicted RBP11.78□□□□□ -0.52
USP17L28-201ENST00000504543 BRAPQ7Z569 592 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
USP17L28-201ENST00000504543 DCAF4Q8WV16 495 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 WASF1Q92558 559 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 P2RX7Q99572 595 aaKnown RBP11.78□□□□□ -0.52
USP17L28-201ENST00000504543 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
USP17L28-201ENST00000504543 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 STX8Q9UNK0 236 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 A0A0G2JMZ2 1700 aa11.78□□□□□ -0.52
USP17L28-201ENST00000504543 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.52
USP17L28-201ENST00000504543 GADD45BO75293 160 aaPredicted RBP11.77□□□□□ -0.53
USP17L28-201ENST00000504543 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
USP17L28-201ENST00000504543 NDUFB10O96000 172 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 CALM1P0DP23 149 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 CALM2P0DP24 149 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 CALM3P0DP25 149 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 CYP2C8P10632 490 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 DSG3P32926 999 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 MRE11P49959 708 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 KIF22Q14807 665 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 KIAA1755Q5JYT7 1200 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 FAM160B2Q86V87 743 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 TMEM63CQ9P1W3 806 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 FEM1BQ9UK73 627 aa11.77□□□□□ -0.53
USP17L28-201ENST00000504543 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 ATP2A1O14983 1001 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 ADD1P35611 737 aaKnown RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 LACTBP83111 547 aaPredicted RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 ZYXQ15942 572 aaKnown RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 IFIT1BQ5T764 474 aaKnown RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 BTNL9Q6UXG8 535 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 CTU1Q7Z7A3 348 aaKnown RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 CHURC1Q8WUH1 139 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 SPATA32Q96LK8 384 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 RBM28Q9NW13 759 aaKnown RBP11.76□□□□□ -0.53
USP17L28-201ENST00000504543 RBPJLQ9UBG7 517 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
USP17L28-201ENST00000504543 NMT2O60551 498 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 BMP3P12645 472 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 COPB2P35606 906 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 OAZ1P54368 228 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 CCNA1P78396 465 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
USP17L28-201ENST00000504543 DGKZQ13574 1117 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
USP17L28-201ENST00000504543 CCDC183Q5T5S1 534 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 CATIPQ7Z7H3 387 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 SHCBP1Q8NEM2 672 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 GPRC5AQ8NFJ5 357 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 LEO1Q8WVC0 666 aaPredicted RBP11.75□□□□□ -0.53
USP17L28-201ENST00000504543 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 MGAMO43451 1857 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
USP17L28-201ENST00000504543 RXRAP19793 462 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 HOXD10P28358 340 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 SLC1A4P43007 532 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.75□□□□□ -0.53
USP17L28-201ENST00000504543 FANCBQ8NB91 859 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 SLF1Q9BQI6 1058 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 RNF26Q9BY78 433 aaPredicted RBP11.75□□□□□ -0.53
USP17L28-201ENST00000504543 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
USP17L28-201ENST00000504543 CPA4Q9UI42 421 aa11.75□□□□□ -0.53
USP17L28-201ENST00000504543 FLOT1O75955 427 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 DEXIO95424 95 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 MAPK4P31152 587 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 FCGRTP55899 365 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 ERVK-24P63145 666 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 TROAPQ12815 778 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 FAM83BQ5T0W9 1011 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
USP17L28-201ENST00000504543 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms