RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RTEL1-TNFRSF6BF6WH68 1400 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 H7C0S8 307 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 ADCY3O60266 1144 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 RFC1P35251 1148 aaPredicted RBP6.65□□□□□ -1.34
LINC02397-201ENST00000504409 FBXO38Q6PIJ6 1188 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 GSDMAQ96QA5 445 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 EDEM3Q9BZQ6 932 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 ABCC5O15440 1437 aa6.65□□□□□ -1.34
LINC02397-201ENST00000504409 UBLCP1Q8WVY7 318 aaPredicted RBP6.65□□□□□ -1.35
LINC02397-201ENST00000504409 SCG3Q8WXD2 468 aaKnown RBP6.65□□□□□ -1.35
LINC02397-201ENST00000504409 PHKBQ93100 1093 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 XPO6Q96QU8 1125 aaKnown RBP6.65□□□□□ -1.35
LINC02397-201ENST00000504409 STK26Q9P289 416 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 ORC6Q9Y5N6 252 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 UNC13BO14795 1591 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 KLHL41O60662 606 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 SERPINB2P05120 415 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 ATG16L1Q676U5 607 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 UNC13DQ70J99 1090 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 LRRC43Q8N309 656 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 KLHL29Q96CT2 875 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 LRGUKQ96M69 825 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 ATAD3AQ9NVI7 634 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 IFNKQ9P0W0 207 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 AMOTL2Q9Y2J4 779 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 TET3O43151 1660 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 GOLGA8MH3BSY2 632 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 PDLIM1O00151 329 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 WFS1O76024 890 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 VDRP11473 427 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 NUP107P57740 925 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 CKAP2LQ8IYA6 745 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 COG1Q8WTW3 980 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 ALKBH8Q96BT7 664 aaKnown RBP6.65□□□□□ -1.35
LINC02397-201ENST00000504409 UNC45AQ9H3U1 944 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 SLC12A7Q9Y666 1083 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 EXOC5O00471 708 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 IMPDH2P12268 514 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 RAP1GDS1P52306 607 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 RPL26P61254 145 aaKnown RBP6.65□□□□□ -1.35
LINC02397-201ENST00000504409 SLF2Q8IX21 1173 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 OR8K1Q8NGG5 319 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 PICK1Q9NRD5 415 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 UBAP1Q9NZ09 502 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 MBD2Q9UBB5 411 aa6.65□□□□□ -1.35
LINC02397-201ENST00000504409 LIG3P49916 1009 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 TMEM87BQ96K49 555 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 TTC1Q99614 292 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 PDE1AP54750 535 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 RBM20Q5T481 1227 aaKnown RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 GIMAP6Q6P9H5 292 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 UBE3BQ7Z3V4 1068 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 NEUROD6Q96NK8 337 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 SELENOSQ9BQE4 189 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 CCDC78A2IDD5 438 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 GMNCA6NCL1 334 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 A8MXQ7 604 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 KRT3P12035 628 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 RAP1GAPP47736 663 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 CATIPQ7Z7H3 387 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 EPSTI1Q96J88 318 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 PAPOLBQ9NRJ5 636 aaKnown RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 GIMAP4Q9NUV9 329 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 ZRANB1Q9UGI0 708 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 PPP6R2O75170 966 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 KRT8P05787 483 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 HNRNPCP07910 306 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 RGS2P41220 211 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 SKIV2L2P42285 1042 aaKnown RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 UBE4AQ14139 1066 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 KBTBD12Q3ZCT8 623 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 CCDC153Q494R4 210 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 MCM10Q7L590 875 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 ST13P5Q8NFI4 369 aaPredicted RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 RIN3Q8TB24 985 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 CMTM5Q96DZ9 223 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 VCPKMTQ9H867 229 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 ATP10AO60312 1499 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 PTCH1Q13635 1447 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 GOLGA8JA6NMD2 632 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 PHEXP78562 749 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 FAM81AQ8TBF8 368 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 BRIP1Q9BX63 1249 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 CNPY2Q9Y2B0 182 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 SMIM31A0A1B0GVY4 71 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 ARHGAP42A6NI28 874 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 SPAG7O75391 227 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 GFPT2O94808 682 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 KRT71Q3SY84 523 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 TCHHL1Q5QJ38 904 aaPredicted RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 KCTD17Q8N5Z5 321 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 CCDC85AQ96PX6 553 aaPredicted RBP6.64□□□□□ -1.35
LINC02397-201ENST00000504409 IDH3BO43837 385 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 BCAR3O75815 825 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 MRFAP1Q9Y605 127 aa6.64□□□□□ -1.35
LINC02397-201ENST00000504409 CPSF1Q10570 1443 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms