RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 GABRQQ9UN88 632 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 MTMR7Q9Y216 660 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 MYH4Q9Y623 1939 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 LOC102724159A0A0B4J2E5 919 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 CCDC69A6NI79 296 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
SKP2-203ENST00000504386 LIFRP42702 1097 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 RGS19P49795 217 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 RCAN1P53805 252 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 FGD1P98174 961 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 PPP2R5BQ15173 497 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 PWP2Q15269 919 aaKnown RBP9.09□□□□□ -0.95
SKP2-203ENST00000504386 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
SKP2-203ENST00000504386 MB21D2Q8IYB1 491 aaPredicted RBP9.09□□□□□ -0.95
SKP2-203ENST00000504386 SAMD3Q8N6K7 520 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 REPS2Q8NFH8 660 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 SH3TC2Q8TF17 1288 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 NEK1Q96PY6 1258 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 ZKSCAN3Q9BRR0 538 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 RANBP17Q9H2T7 1088 aaKnown RBP9.09□□□□□ -0.95
SKP2-203ENST00000504386 CCPG1Q9ULG6 757 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 CNPY2Q9Y2B0 182 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 TACC3Q9Y6A5 838 aa9.09□□□□□ -0.95
SKP2-203ENST00000504386 A0A0G2JMZ2 1700 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 ASB14A6NK59 587 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 PRC1O43663 620 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 CCL5P13501 91 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
SKP2-203ENST00000504386 ELNP15502 786 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 SMARCA1P28370 1054 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 HSPA4P34932 840 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 GJA8P48165 433 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 MLLT1Q03111 559 aaPredicted RBP9.08□□□□□ -0.96
SKP2-203ENST00000504386 SEC23AQ15436 765 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 DHX32Q7L7V1 743 aaKnown RBP9.08□□□□□ -0.96
SKP2-203ENST00000504386 MCF2L2Q86YR7 1114 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 PIP4P2Q8N4L2 257 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 ANKLE1Q8NAG6 615 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.08□□□□□ -0.96
SKP2-203ENST00000504386 RAVER2Q9HCJ3 691 aaKnown RBP9.08□□□□□ -0.96
SKP2-203ENST00000504386 GPCPD1Q9NPB8 672 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 RNF146Q9NTX7 359 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 ADD3Q9UEY8 706 aaKnown RBP9.08□□□□□ -0.96
SKP2-203ENST00000504386 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 MGAMO43451 1857 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 ZNF236Q9UL36 1845 aa9.08□□□□□ -0.96
SKP2-203ENST00000504386 ABCB11O95342 1321 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 FRMPD2Q68DX3 1309 aaPredicted RBP9.07□□□□□ -0.96
SKP2-203ENST00000504386 SYNGAP1Q96PV0 1343 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 CCDC196A0A1B0GTZ2 297 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 KLRF2D3W0D1 207 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 POTEB2H3BUK9 544 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 ALAS1P13196 640 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 SOX10P56693 466 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 CAP1Q01518 475 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 GRM4Q14833 912 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 MAP3K21Q5TCX8 1036 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 CCDC174Q6PII3 467 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 BLOC1S2Q6QNY1 142 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 CYB5R4Q7L1T6 521 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 TEX2Q8IWB9 1127 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 TRIB2Q92519 343 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 TRERF1Q96PN7 1200 aa9.07□□□□□ -0.96
SKP2-203ENST00000504386 PAK6Q9NQU5 681 aaPredicted RBP9.07□□□□□ -0.96
SKP2-203ENST00000504386 RBM28Q9NW13 759 aaKnown RBP9.07□□□□□ -0.96
SKP2-203ENST00000504386 MAP3K20Q9NYL2 800 aaKnown RBP9.07□□□□□ -0.96
SKP2-203ENST00000504386 SEC63Q9UGP8 760 aaKnown RBP9.07□□□□□ -0.96
SKP2-203ENST00000504386 MRPL11Q9Y3B7 192 aaKnown RBP9.07□□□□□ -0.96
SKP2-203ENST00000504386 SGPL1O95470 568 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 SLC16A2P36021 539 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 CDC37Q16543 378 aaPredicted RBP9.06□□□□□ -0.96
SKP2-203ENST00000504386 STOX1Q6ZVD7 989 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 SGMS1Q86VZ5 419 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 FBXO11Q86XK2 927 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 ZNF654Q8IZM8 581 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 IL27Q8NEV9 243 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 IGDCC4Q8TDY8 1250 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 U2AF1L4Q8WU68 220 aaKnown RBP9.06□□□□□ -0.96
SKP2-203ENST00000504386 KCNB2Q92953 911 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 MAML3Q96JK9 1138 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 HTATIP2Q9BUP3 242 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 AMNQ9BXJ7 453 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 HOMER2Q9NSB8 354 aa9.06□□□□□ -0.96
SKP2-203ENST00000504386 RBM27Q9P2N5 1060 aaKnown RBP9.06□□□□□ -0.96
SKP2-203ENST00000504386 DNAJC25-GNG10A0A024R161 153 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 PALM3A6NDB9 673 aaPredicted RBP9.05□□□□□ -0.96
SKP2-203ENST00000504386 SH2B2O14492 632 aaPredicted RBP9.05□□□□□ -0.96
SKP2-203ENST00000504386 ZBTB5O15062 677 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 PEX10O60683 326 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 TFRCP02786 760 aaKnown RBP9.05□□□□□ -0.96
SKP2-203ENST00000504386 GOLGA8HP0CJ92 632 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 ANAPC15P60006 121 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 CACNB2Q08289 660 aaPredicted RBP9.05□□□□□ -0.96
SKP2-203ENST00000504386 TROAPQ12815 778 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 ZNF792Q3KQV3 632 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 TTBK2Q6IQ55 1244 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms