RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 TMOD1P28289 359 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 PHBP35232 272 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 CLRN2A0PK11 232 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 PER1O15534 1290 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 DLATP10515 647 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 MYSM1Q5VVJ2 828 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 ADALQ6DHV7 355 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 CCDC51Q96ER9 411 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 APOL6Q9BWW8 343 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 KAT6BQ8WYB5 2073 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 LRRIQ4A6NIV6 560 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 M0R2C6 588 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 RPN1P04843 607 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 MGARPQ8TDB4 240 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 ATP2A3Q93084 1043 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 RIOK3O14730 519 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 HGSO14964 777 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 CCND2P30279 289 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 MYL7Q01449 175 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 MIS18BP1Q6P0N0 1132 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 PDZD4Q76G19 769 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 HAUS1Q96CS2 278 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 TM6SF1Q9BZW5 370 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 BUB1O43683 1085 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 USP14P54578 494 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 PSMD6Q15008 389 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 ELF2Q15723 593 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 RPS6KC1Q96S38 1066 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 TRIM56Q9BRZ2 755 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 TRPC5Q9UL62 973 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 YEATS2Q9ULM3 1422 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 NEO1Q92859 1461 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 DPP9Q86TI2 863 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 HESX1Q9UBX0 185 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 AKT3Q9Y243 479 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 RABGAP1Q9Y3P9 1069 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 KDM5CP41229 1560 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 SYNJ2BP-COX16A0A087WUM0 186 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 CCDC13Q8IYE1 715 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 IL17REQ8NFR9 667 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 SCYL1Q96KG9 808 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 VCX3BQ9H321 246 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 ZNF277Q9NRM2 450 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 COX16Q9P0S2 106 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 EFCAB6Q5THR3 1501 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 LOC102724428A0A0B4J2F2 783 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 GTPBP6O43824 516 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 ADCY8P40145 1251 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 SIK1P57059 783 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 KCTD2Q14681 263 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 PLCB4Q15147 1175 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 ERFEQ4G0M1 354 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 NLGN1Q8N2Q7 840 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 NME8Q8N427 588 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 ANKRD42Q8N9B4 389 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 SYMPKQ92797 1274 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 CSRNP1Q96S65 589 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 XPO4Q9C0E2 1151 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 SLC39A2Q9NP94 309 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 COL4A3BPQ9Y5P4 624 aa7.88□□□□□ -1.15
SYNPO2-205ENST00000504178 NDUFAB1O14561 156 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 KCNK3O14649 394 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 CASQ2O14958 399 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 CIAO1O76071 339 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 TRIM37O94972 964 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 ADORA1P30542 326 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 POLR2FP61218 127 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 CTAGE3PQ8IX95 158 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 ARHGAP24Q8N264 748 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 ANKRD36BP1Q96IX9 119 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 RILPQ96NA2 401 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 MIS12Q9H081 205 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 LEMD3Q9Y2U8 911 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 KDM5DQ9BY66 1539 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 LONP1P36776 959 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 UBXN2AP68543 259 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 PRPSAP1Q14558 356 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 C17orf53Q8N3J3 647 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 PPP4R1Q8TF05 950 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 ZNF577Q9BSK1 485 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 RABEP2Q9H5N1 569 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 RIC8AQ9NPQ8 531 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 NLRP1Q9C000 1473 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 CFAP65Q6ZU64 1925 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 BUB1BO60566 1050 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 NAA25Q14CX7 972 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 KCTD1Q719H9 257 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 VSIG1Q86XK7 387 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 SSH3Q8TE77 659 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 NUF2Q9BZD4 464 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 TPCN1Q9ULQ1 816 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 NPHP4O75161 1426 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 INSRP06213 1382 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 KRIT1O00522 736 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 SEMA3EO15041 775 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 GUCY2FP51841 1108 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 CCNA1P78396 465 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms