RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 CCDC174Q6PII3 467 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 RAB11FIP4Q86YS3 637 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 SHCBP1Q8NEM2 672 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 IL27Q8NEV9 243 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 COA7Q96BR5 231 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 ZNF274Q96GC6 653 aaPredicted RBP21.15■□□□□ 0.98
DDR1-252ENST00000504152 KIF2CQ99661 725 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 MROH8Q9H579 483 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 EFCC1Q9HA90 598 aa21.15■□□□□ 0.98
DDR1-252ENST00000504152 COL11A1P12107 1806 aaPredicted RBP21.14■□□□□ 0.97
DDR1-252ENST00000504152 GOLGA8AA7E2F4 631 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 GOLGA8BA8MQT2 603 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 RTN1Q16799 776 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 WDR78Q5VTH9 848 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 SNRNP48Q6IEG0 339 aaKnown RBP21.14■□□□□ 0.97
DDR1-252ENST00000504152 NCAPG2Q86XI2 1143 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 TRIM47Q96LD4 638 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 ARHGAP39Q9C0H5 1083 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 PORCNQ9H237 461 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 RIOX1Q9H6W3 641 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 JMJD4Q9H9V9 463 aa21.14■□□□□ 0.97
DDR1-252ENST00000504152 ERCC3P19447 782 aa21.13■□□□□ 0.97
DDR1-252ENST00000504152 PDIA3P30101 505 aaKnown RBP21.13■□□□□ 0.97
DDR1-252ENST00000504152 METAP2P50579 478 aaKnown RBP eCLIP21.13■□□□□ 0.973e-6■■■■□ 25.7
DDR1-252ENST00000504152 RABEP1Q15276 862 aa21.13■□□□□ 0.97
DDR1-252ENST00000504152 PLEKHH3Q7Z736 793 aa21.13■□□□□ 0.97
DDR1-252ENST00000504152 LARP6Q9BRS8 491 aaKnown RBP21.13■□□□□ 0.97
DDR1-252ENST00000504152 STRNO43815 780 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 ICAM1P05362 532 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 CTGFP29279 349 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 AK2P54819 239 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 TKFCQ3LXA3 575 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 AGBL1Q96MI9 1066 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 SPZ1Q9BXG8 430 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 CCPG1Q9ULG6 757 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 TRIM17Q9Y577 477 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 IVNS1ABPQ9Y6Y0 642 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 A0A0G2JMZ2 1700 aa21.12■□□□□ 0.97
DDR1-252ENST00000504152 ZNF536O15090 1300 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 PRMT2P55345 433 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 TRAF1Q13077 416 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 CDC37Q16543 378 aaPredicted RBP21.11■□□□□ 0.97
DDR1-252ENST00000504152 TMTC3Q6ZXV5 915 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 GPR142Q7Z601 462 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 CTU1Q7Z7A3 348 aaKnown RBP21.11■□□□□ 0.97
DDR1-252ENST00000504152 NBPF11Q86T75 865 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 CCDC82Q8N4S0 544 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 SRBD1Q8N5C6 995 aaKnown RBP21.11■□□□□ 0.97
DDR1-252ENST00000504152 MTMR8Q96EF0 704 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 FBXO40Q9UH90 709 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 HPS5Q9UPZ3 1129 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 RIPK3Q9Y572 518 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 MGAMO43451 1857 aa21.11■□□□□ 0.97
DDR1-252ENST00000504152 ZBTB5O15062 677 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 CYTH3O43739 400 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 PLEKHA8P1O95397 391 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 ALAS1P13196 640 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 PTPREP23469 700 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 ADD1P35611 737 aaKnown RBP21.1■□□□□ 0.97
DDR1-252ENST00000504152 OTOP1Q7RTM1 612 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 FBXO11Q86XK2 927 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 CHST13Q8NET6 341 aa21.1■□□□□ 0.97
DDR1-252ENST00000504152 RRP36Q96EU6 259 aaKnown RBP21.1■□□□□ 0.97
DDR1-252ENST00000504152 PNMA6FA0A0J9YX94 578 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 FCER1AP12319 257 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 CDC27P30260 824 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 CCT2P78371 535 aaKnown RBP21.09■□□□□ 0.97
DDR1-252ENST00000504152 CAP1Q01518 475 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 PKN2Q16513 984 aaKnown RBP21.09■□□□□ 0.97
DDR1-252ENST00000504152 QRICH1Q2TAL8 776 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 HOMER1Q86YM7 354 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 CMTR1Q8N1G2 835 aaKnown RBP21.09■□□□□ 0.97
DDR1-252ENST00000504152 TRERF1Q96PN7 1200 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 PIGSQ96S52 555 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 NUDT12Q9BQG2 462 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 SLKQ9H2G2 1235 aaPredicted RBP21.09■□□□□ 0.97
DDR1-252ENST00000504152 FAM217BQ9NTX9 383 aaPredicted RBP21.09■□□□□ 0.97
DDR1-252ENST00000504152 SRRDQ9UH36 339 aa21.09■□□□□ 0.97
DDR1-252ENST00000504152 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 CCDC85CA6NKD9 419 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 ST18O60284 1047 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 STK3Q13188 491 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 KCTD2Q14681 263 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 ABRAQ8N0Z2 381 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 PIBF1Q8WXW3 757 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 AMNQ9BXJ7 453 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 HOMER2Q9NSB8 354 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 SEC63Q9UGP8 760 aaKnown RBP21.08■□□□□ 0.97
DDR1-252ENST00000504152 BAZ2BQ9UIF8 2168 aaKnown RBP21.08■□□□□ 0.97
DDR1-252ENST00000504152 GJD2Q9UKL4 321 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 TPCN1Q9ULQ1 816 aa21.08■□□□□ 0.97
DDR1-252ENST00000504152 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
DDR1-252ENST00000504152 USH1GQ495M9 461 aa21.07■□□□□ 0.96
DDR1-252ENST00000504152 CPLX2Q6PUV4 134 aaKnown RBP21.07■□□□□ 0.96
DDR1-252ENST00000504152 SOCS4Q8WXH5 440 aa21.07■□□□□ 0.96
DDR1-252ENST00000504152 MMP19Q99542 508 aa21.07■□□□□ 0.96
DDR1-252ENST00000504152 ACAD9Q9H845 621 aa21.07■□□□□ 0.96
DDR1-252ENST00000504152 RNF146Q9NTX7 359 aa21.07■□□□□ 0.96
DDR1-252ENST00000504152 LIMCH1Q9UPQ0 1083 aa21.07■□□□□ 0.96
DDR1-252ENST00000504152 NID2Q14112 1375 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms