RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 CYBAP13498 195 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 ZNF543Q08ER8 600 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 UBE2Q1Q7Z7E8 422 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 TRERF1Q96PN7 1200 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 TINF2Q9BSI4 451 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 RNF146Q9NTX7 359 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 RIPK3Q9Y572 518 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 SEPT4O43236 478 aa20.98■□□□□ 0.95
NFKB1-204ENST00000504044 ICAM1P05362 532 aa20.98■□□□□ 0.95
NFKB1-204ENST00000504044 CYP21A2P08686 494 aa20.98■□□□□ 0.95
NFKB1-204ENST00000504044 SNHG28P0DPA3 235 aa20.98■□□□□ 0.95
NFKB1-204ENST00000504044 PTH1RQ03431 593 aa20.98■□□□□ 0.95
NFKB1-204ENST00000504044 ASPRV1Q53RT3 343 aa20.98■□□□□ 0.95
NFKB1-204ENST00000504044 ZNF467Q7Z7K2 595 aaPredicted RBP20.98■□□□□ 0.95
NFKB1-204ENST00000504044 PAWRQ96IZ0 340 aaKnown RBP20.98■□□□□ 0.95
NFKB1-204ENST00000504044 RANBP17Q9H2T7 1088 aaKnown RBP20.98■□□□□ 0.95
NFKB1-204ENST00000504044 C11orf49Q9H6J7 331 aa20.98■□□□□ 0.95
NFKB1-204ENST00000504044 ENAHQ8N8S7 591 aaPredicted RBP20.97■□□□□ 0.95
NFKB1-204ENST00000504044 ARRDC4Q8NCT1 418 aa20.97■□□□□ 0.95
NFKB1-204ENST00000504044 AGBL1Q96MI9 1066 aa20.97■□□□□ 0.95
NFKB1-204ENST00000504044 ESYT1Q9BSJ8 1104 aa20.97■□□□□ 0.95
NFKB1-204ENST00000504044 RBM8AQ9Y5S9 174 aaKnown RBP20.97■□□□□ 0.95
NFKB1-204ENST00000504044 SYNGAP1Q96PV0 1343 aa20.97■□□□□ 0.95
NFKB1-204ENST00000504044 POTEB2H3BUK9 544 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 IGHA2P01877 340 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
NFKB1-204ENST00000504044 SLC16A2P36021 539 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 RNF20Q5VTR2 975 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 ERICH6BQ5W0A0 696 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 LHX8Q68G74 356 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 TTBK2Q6IQ55 1244 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 ANO2Q9NQ90 1003 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 PARP14Q460N5 1801 aa20.96■□□□□ 0.95
NFKB1-204ENST00000504044 DNAJC25-GNG10A0A024R161 153 aa20.95■□□□□ 0.94
NFKB1-204ENST00000504044 E7EWF7 191 aa20.95■□□□□ 0.94
NFKB1-204ENST00000504044 IFIT3O14879 490 aaKnown RBP20.95■□□□□ 0.94
NFKB1-204ENST00000504044 EVI5O60447 810 aa20.95■□□□□ 0.94
NFKB1-204ENST00000504044 CDC45O75419 566 aa20.95■□□□□ 0.94
NFKB1-204ENST00000504044 ZNF536O15090 1300 aa20.95■□□□□ 0.94
NFKB1-204ENST00000504044 LAMA4Q16363 1823 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 ASB14A6NK59 587 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 KBTBD13C9JR72 458 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 DHX16O60231 1041 aaKnown RBP20.94■□□□□ 0.94
NFKB1-204ENST00000504044 RARBP10826 455 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 AKR1A1P14550 325 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 MAMDC4Q6UXC1 1216 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 RASGRP2Q7LDG7 609 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 MPHOSPH6Q99547 160 aaKnown RBP20.94■□□□□ 0.94
NFKB1-204ENST00000504044 WDR19Q8NEZ3 1342 aa20.94■□□□□ 0.94
NFKB1-204ENST00000504044 DNM1LO00429 736 aa20.93■□□□□ 0.94
NFKB1-204ENST00000504044 WTAPQ15007 396 aa20.93■□□□□ 0.94
NFKB1-204ENST00000504044 NSMFQ6X4W1 530 aa20.93■□□□□ 0.94
NFKB1-204ENST00000504044 MTA3Q9BTC8 594 aa20.93■□□□□ 0.94
NFKB1-204ENST00000504044 A1CFQ9NQ94 594 aaKnown RBP20.93■□□□□ 0.94
NFKB1-204ENST00000504044 CENPFP49454 3210 aa20.93■□□□□ 0.94
NFKB1-204ENST00000504044 SNAP25P60880 206 aa20.92■□□□□ 0.94
NFKB1-204ENST00000504044 TRAF1Q13077 416 aa20.92■□□□□ 0.94
NFKB1-204ENST00000504044 TRPV1Q8NER1 839 aa20.92■□□□□ 0.94
NFKB1-204ENST00000504044 DIS3LQ8TF46 1054 aaKnown RBP20.92■□□□□ 0.94
NFKB1-204ENST00000504044 MAF1Q9H063 256 aa20.92■□□□□ 0.94
NFKB1-204ENST00000504044 LSG1Q9H089 658 aaKnown RBP20.92■□□□□ 0.94
NFKB1-204ENST00000504044 ABHD16BQ9H3Z7 469 aa20.92■□□□□ 0.94
NFKB1-204ENST00000504044 ADD3Q9UEY8 706 aaKnown RBP20.92■□□□□ 0.94
NFKB1-204ENST00000504044 ZHX1Q9UKY1 873 aaPredicted RBP20.92■□□□□ 0.94
NFKB1-204ENST00000504044 FAM184BQ9ULE4 1060 aa20.92■□□□□ 0.94
NFKB1-204ENST00000504044 B4DLN1 442 aa20.91■□□□□ 0.94
NFKB1-204ENST00000504044 GOLGA8HP0CJ92 632 aa20.91■□□□□ 0.94
NFKB1-204ENST00000504044 COL11A1P12107 1806 aaPredicted RBP20.91■□□□□ 0.94
NFKB1-204ENST00000504044 MRPL12P52815 198 aaKnown RBP20.91■□□□□ 0.94
NFKB1-204ENST00000504044 PRAMEF19Q5SWL8 479 aa20.91■□□□□ 0.94
NFKB1-204ENST00000504044 CYB5R4Q7L1T6 521 aa20.91■□□□□ 0.94
NFKB1-204ENST00000504044 CATIPQ7Z7H3 387 aa20.91■□□□□ 0.94
NFKB1-204ENST00000504044 RNF180Q86T96 592 aa20.91■□□□□ 0.94
NFKB1-204ENST00000504044 TMTC2Q8N394 836 aa20.91■□□□□ 0.94
NFKB1-204ENST00000504044 LOC102724159A0A0B4J2E5 919 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 PWP2Q15269 919 aaKnown RBP20.9■□□□□ 0.94
NFKB1-204ENST00000504044 SEC23AQ15436 765 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 TMEM67Q5HYA8 995 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 ARMCX2Q7L311 632 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 FAM133AQ8N9E0 248 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 UBA5Q9GZZ9 404 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 SPC25Q9HBM1 224 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 XPNPEP3Q9NQH7 507 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.9■□□□□ 0.94
NFKB1-204ENST00000504044 CYP39A1Q9NYL5 469 aa20.9■□□□□ 0.94
NFKB1-204ENST00000504044 PTPDC1A2A3K4 754 aa20.89■□□□□ 0.93
NFKB1-204ENST00000504044 MYCNP04198 464 aaPredicted RBP20.89■□□□□ 0.93
NFKB1-204ENST00000504044 MCM5P33992 734 aa20.89■□□□□ 0.93
NFKB1-204ENST00000504044 ACVR2BQ13705 512 aa20.89■□□□□ 0.93
NFKB1-204ENST00000504044 CDC37Q16543 378 aaPredicted RBP20.89■□□□□ 0.93
NFKB1-204ENST00000504044 PPP4R2Q9NY27 417 aa20.89■□□□□ 0.93
NFKB1-204ENST00000504044 ABCB11O95342 1321 aa20.88■□□□□ 0.93
NFKB1-204ENST00000504044 ZNF865P0CJ78 1059 aaPredicted RBP20.88■□□□□ 0.93
NFKB1-204ENST00000504044 MUM1L1Q5H9M0 696 aa20.88■□□□□ 0.93
NFKB1-204ENST00000504044 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
NFKB1-204ENST00000504044 RNF207Q6ZRF8 634 aa20.88■□□□□ 0.93
NFKB1-204ENST00000504044 MCF2L2Q86YR7 1114 aa20.88■□□□□ 0.93
NFKB1-204ENST00000504044 CCDC144CPQ8IYA2 1237 aa20.88■□□□□ 0.93
NFKB1-204ENST00000504044 ADGRF4Q8IZF3 695 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms