RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 SCAND2PQ9GZW5 306 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 KIAA1683Q9H0B3 1180 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 GOPCQ9HD26 462 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 EMILIN3Q9NT22 766 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 FBXO28Q9NVF7 368 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 PRR12Q9ULL5 1215 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 PCDHA6Q9UN73 950 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 PCDHA8Q9Y5H6 950 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 TRPM7Q96QT4 1865 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 LCTP09848 1927 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 IQCA1LA6NCM1 817 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 OPLAHO14841 1288 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 EDIL3O43854 480 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 YEATS4O95619 227 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 XBP1P17861 261 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 PTMSP20962 102 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 NAPAP54920 295 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 UBE2HP62256 183 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 SAFBQ15424 915 aaKnown RBP eCLIP7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 SF3A1Q15459 793 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 SUPT20HL1Q3ZLR7 823 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 EAPPQ56P03 285 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 SYDE2Q5VT97 1194 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 BLIDQ8IZY5 108 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 FAM177A1Q8N128 213 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 HOOK2Q96ED9 719 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 P2RX7Q99572 595 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 GOLPH3LQ9H4A5 285 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 TMEM63CQ9P1W3 806 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 SEC63Q9UGP8 760 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 CFAP45Q9UL16 551 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 PCDHB6Q9Y5E3 794 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 DDX49Q9Y6V7 483 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-203ENST00000503464 SMCO2A6NFE2 343 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 hCG_1984214I3L0E3 225 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 TRAF5O00463 557 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 PLA2G6O60733 806 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 LIG1P18858 919 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 VCAM1P19320 739 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 CALML3P27482 149 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 CLK2P49760 499 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 GRIN1Q05586 938 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 SPP2Q13103 211 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 GNL2Q13823 731 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 SLC39A14Q15043 492 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 SKOR2Q2VWA4 1001 aaPredicted RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 AXDND1Q5T1B0 1012 aaPredicted RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 MAP1SQ66K74 1059 aaPredicted RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 PPP1R18Q6NYC8 613 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 MAMSTRQ6ZN01 415 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 PIK3AP1Q6ZUJ8 805 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 ZNF713Q8N859 430 aaPredicted RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 ZNF280CQ8ND82 737 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 CCDC148Q8NFR7 591 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 CLMNQ96JQ2 1002 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 C12orf42Q96LP6 360 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 FEZ1Q99689 392 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 RANBP17Q9H2T7 1088 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 SH2D4AQ9H788 454 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 TMEM260Q9NX78 707 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 ISY1Q9ULR0 285 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 PCDHA7Q9UN72 937 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 AFG3L2Q9Y4W6 797 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 ZHX2Q9Y6X8 837 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 ZNF536O15090 1300 aa7.92□□□□□ -1.14
TOPBP1-203ENST00000503464 TRIM75PA6NK02 468 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 WDR46O15213 610 aaKnown RBP7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 SPTLC2O15270 562 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 MBD3O95983 291 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 ADCY7P51828 1080 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 STAT2P52630 851 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 HMGCS2P54868 508 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 BACE1P56817 501 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 MAP3K9P80192 1104 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 MKRN4PQ13434 485 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 UBE2SQ16763 222 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 TPRNQ4KMQ1 711 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 RILPL1Q5EBL4 403 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 GALNT17Q6IS24 598 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 CAVIN1Q6NZI2 390 aaKnown RBP7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 PNMA8AQ86V59 439 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 LPAR1Q92633 364 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 WNK4Q96J92 1243 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 GZF1Q9H116 711 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 RPAP3Q9H6T3 665 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 RRAGCQ9HB90 399 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 NMRK2Q9NPI5 230 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 RIC8AQ9NPQ8 531 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 PICK1Q9NRD5 415 aa7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 FBXO2Q9UK22 296 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-203ENST00000503464 A0A1W2PQ27 194 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 A0A1W2PQ64 194 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 A0A1W2PQD8 194 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 MEIS2O14770 477 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 PPP6R2O75170 966 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms