RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 CDC37Q16543 378 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-216ENST00000502848 SHROOM1Q2M3G4 852 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-216ENST00000502848 FAM173BQ6P4H8 233 aa10.38□□□□□ -0.75
NR1I3-216ENST00000502848 PRPF38AQ8NAV1 312 aaKnown RBP10.38□□□□□ -0.75
NR1I3-216ENST00000502848 GPT2Q8TD30 523 aa10.38□□□□□ -0.75
NR1I3-216ENST00000502848 ACER1Q8TDN7 264 aa10.38□□□□□ -0.75
NR1I3-216ENST00000502848 GPKOWQ92917 476 aaPredicted RBP eCLIP10.38□□□□□ -0.754e-7■■■■■ 40.8
NR1I3-216ENST00000502848 CUL5Q93034 780 aa10.38□□□□□ -0.75
NR1I3-216ENST00000502848 FERMT2Q96AC1 680 aa10.38□□□□□ -0.75
NR1I3-216ENST00000502848 UBA5Q9GZZ9 404 aa10.38□□□□□ -0.75
NR1I3-216ENST00000502848 MAP3K20Q9NYL2 800 aaKnown RBP10.38□□□□□ -0.75
NR1I3-216ENST00000502848 TFIP11Q9UBB9 837 aaKnown RBP10.38□□□□□ -0.75
NR1I3-216ENST00000502848 CSADQ9Y600 493 aa10.38□□□□□ -0.75
NR1I3-216ENST00000502848 hCG_1642624A0A1W2PR95 340 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 SMCO2A6NFE2 343 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 PIK3CDO00329 1044 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 CUTAO60888 179 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 USP2O75604 605 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 GCFC2P16383 781 aaKnown RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 INPP5BP32019 993 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 PRPHP41219 470 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 ME1P48163 572 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 CLK2P49760 499 aaKnown RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 OAZ1P54368 228 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 ZNF445P59923 1031 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 GHRHRQ02643 423 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 IKQ13123 557 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 NONOQ15233 471 aaKnown RBP eCLIP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 QRICH1Q2TAL8 776 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 FBXO11Q86XK2 927 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 HOMER1Q86YM7 354 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 ANKRD13AQ8IZ07 590 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
NR1I3-216ENST00000502848 OXER1Q8TDS5 423 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 GDPD2Q9HCC8 539 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 PRR12Q9ULL5 1215 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 PCDHA6Q9UN73 950 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 MTMR7Q9Y216 660 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 PCDHA8Q9Y5H6 950 aa10.37□□□□□ -0.75
NR1I3-216ENST00000502848 ABCB11O95342 1321 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 POTECB2RU33 542 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 CTAGE5O15320 804 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 PTPREP23469 700 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 CMA1P23946 247 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 TOB1P50616 345 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 PPATQ06203 517 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 FOXD4L6Q3SYB3 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 MOXD1Q6UVY6 613 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 FOXD4L3Q6VB84 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 ELOA2Q8IYF1 753 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 PROCA1Q8NCQ7 364 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 AFG3L2Q9Y4W6 797 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 PCDHA1Q9Y5I3 950 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 SRPRBQ9Y5M8 271 aaKnown RBP10.36□□□□□ -0.75
NR1I3-216ENST00000502848 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
NR1I3-216ENST00000502848 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 CXCL11O14625 94 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 ATP2A1O14983 1001 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 RAD21O60216 631 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-216ENST00000502848 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-216ENST00000502848 VCAM1P19320 739 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 SLC16A2P36021 539 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 MTMR2Q13614 643 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 VGLL4Q14135 290 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 GSE1Q14687 1217 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-216ENST00000502848 PPP4R3AQ6IN85 833 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
NR1I3-216ENST00000502848 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-216ENST00000502848 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 ERO1BQ86YB8 467 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 PPP1R9AQ9ULJ8 1098 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 PCDHA7Q9UN72 937 aa10.35□□□□□ -0.75
NR1I3-216ENST00000502848 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms