RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 LONRF2Q1L5Z9 754 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 NSMFQ6X4W1 530 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 CRACR2BQ8N4Y2 399 aaPredicted RBP9.16□□□□□ -0.94
NEDD4-203ENST00000502612 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 DUSP13Q9UII6 198 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 CD2APQ9Y5K6 639 aa9.16□□□□□ -0.94
NEDD4-203ENST00000502612 FKTNO75072 461 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 SYPP08247 313 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 SNRPB2P08579 225 aaKnown RBP9.15□□□□□ -0.94
NEDD4-203ENST00000502612 ECI1P42126 302 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 KCNJ6P48051 423 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 SCRN1Q12765 414 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 MSMPQ1L6U9 139 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 CWF19L1Q69YN2 538 aaKnown RBP9.15□□□□□ -0.94
NEDD4-203ENST00000502612 C16orf86Q6ZW13 317 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 KIAA0907Q7Z7F0 614 aaPredicted RBP9.15□□□□□ -0.94
NEDD4-203ENST00000502612 TMEM145Q8NBT3 493 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 FCRL3Q96P31 734 aaPredicted RBP9.15□□□□□ -0.94
NEDD4-203ENST00000502612 DHRS4Q9BTZ2 278 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 PCDHA11Q9Y5I1 949 aa9.15□□□□□ -0.94
NEDD4-203ENST00000502612 TMEM265A0A087WTH1 108 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 IGHA1P01876 353 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 VAV1P15498 845 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 BMP8BP34820 402 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 POU4F1Q01851 419 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 RTP2Q5QGT7 225 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 ZPBP2Q6X784 338 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 THAP5Q7Z6K1 395 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 CREG2Q8IUH2 290 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 C1orf159Q96HA4 380 aa9.14□□□□□ -0.95
NEDD4-203ENST00000502612 ZNF205O95201 554 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 ESR1P03372 595 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 LTKP29376 864 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 BNIP3Q12983 259 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 NTRK3Q16288 839 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 AOC3Q16853 763 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 DENND5AQ6IQ26 1287 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 GPRC5CQ9NQ84 441 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 TCFL5Q9UL49 500 aa9.13□□□□□ -0.95
NEDD4-203ENST00000502612 AURKAO14965 403 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 RAPGEF3O95398 923 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 MED26O95402 600 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 THBDP07204 575 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 GSTM1P09488 218 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 SLC51AQ86UW1 340 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 SCUBE1Q8IWY4 988 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 HRASLS5Q96KN8 279 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 CYP26B1Q9NR63 512 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 AP5S1Q9NUS5 200 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 SNX11Q9Y5W9 270 aa9.12□□□□□ -0.95
NEDD4-203ENST00000502612 C6orf222P0C671 652 aaPredicted RBP9.11□□□□□ -0.95
NEDD4-203ENST00000502612 HOXC12P31275 282 aa9.11□□□□□ -0.95
NEDD4-203ENST00000502612 PCBP3P57721 371 aaKnown RBP9.11□□□□□ -0.95
NEDD4-203ENST00000502612 TCEA2Q15560 299 aa9.11□□□□□ -0.95
NEDD4-203ENST00000502612 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
NEDD4-203ENST00000502612 KREMEN2Q8NCW0 462 aa9.11□□□□□ -0.95
NEDD4-203ENST00000502612 FEZ1Q99689 392 aa9.11□□□□□ -0.95
NEDD4-203ENST00000502612 NCOA5Q9HCD5 579 aaKnown RBP9.11□□□□□ -0.95
NEDD4-203ENST00000502612 BACE2Q9Y5Z0 518 aa9.11□□□□□ -0.95
NEDD4-203ENST00000502612 TMEM82A0PJX8 343 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 ANKRD62A6NC57 917 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 C2orf71A6NGG8 1288 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 ARNTLO00327 626 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 SCG5P05408 212 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 GYS2P54840 703 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
NEDD4-203ENST00000502612 TEKQ02763 1124 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 EGR3Q06889 387 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 ZC3H12BQ5HYM0 836 aaKnown RBP9.1□□□□□ -0.95
NEDD4-203ENST00000502612 SLC35F1Q5T1Q4 408 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 ZNF574Q6ZN55 896 aaPredicted RBP9.1□□□□□ -0.95
NEDD4-203ENST00000502612 WFDC3Q8IUB2 231 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 FRS2Q8WU20 508 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 KCTD13Q8WZ19 329 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 COPS5Q92905 334 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 CLUHP3Q96NS8 147 aa9.1□□□□□ -0.95
NEDD4-203ENST00000502612 IPO9Q96P70 1041 aaKnown RBP9.1□□□□□ -0.95
NEDD4-203ENST00000502612 TMEFF2Q9UIK5 374 aaPredicted RBP9.1□□□□□ -0.95
NEDD4-203ENST00000502612 CANXP27824 592 aaKnown RBP9.09□□□□□ -0.95
NEDD4-203ENST00000502612 PRKCQQ04759 706 aa9.09□□□□□ -0.95
NEDD4-203ENST00000502612 MAP4K2Q12851 820 aa9.09□□□□□ -0.95
NEDD4-203ENST00000502612 DALRD3Q5D0E6 543 aaKnown RBP9.09□□□□□ -0.95
NEDD4-203ENST00000502612 TMPRSS7Q7RTY8 843 aa9.09□□□□□ -0.95
NEDD4-203ENST00000502612 NPLOC4Q8TAT6 608 aa9.09□□□□□ -0.95
NEDD4-203ENST00000502612 CDADC1Q9BWV3 514 aa9.09□□□□□ -0.95
NEDD4-203ENST00000502612 CLEC1BQ9P126 229 aa9.09□□□□□ -0.95
NEDD4-203ENST00000502612 SSU72P8A0A1W2PR75 194 aa9.08□□□□□ -0.96
NEDD4-203ENST00000502612 PABPC4Q13310 644 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEDD4-203ENST00000502612 IKZF1Q13422 519 aa9.08□□□□□ -0.96
NEDD4-203ENST00000502612 USP53Q70EK8 1073 aa9.08□□□□□ -0.96
NEDD4-203ENST00000502612 SPRED2Q7Z698 418 aa9.08□□□□□ -0.96
NEDD4-203ENST00000502612 BCL7CQ8WUZ0 217 aaPredicted RBP9.08□□□□□ -0.96
NEDD4-203ENST00000502612 ASB11Q8WXH4 323 aa9.08□□□□□ -0.96
NEDD4-203ENST00000502612 ASXL2Q76L83 1435 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 CLSTN1O94985 981 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 PLS3P13797 630 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 RPL10P27635 214 aaKnown RBP9.07□□□□□ -0.96
NEDD4-203ENST00000502612 RCSD1Q6JBY9 416 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 KCNT2Q6UVM3 1135 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms