RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 NID2Q14112 1375 aa12.53□□□□□ -0.4
UBE2D3-212ENST00000502563 PLXNB2O15031 1838 aa12.53□□□□□ -0.4
UBE2D3-212ENST00000502563 DOCK3Q8IZD9 2030 aa12.52□□□□□ -0.4
UBE2D3-212ENST00000502563 LOC102724159A0A0B4J2E5 919 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 RAD21O60216 631 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 RGS2P41220 211 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 FLT3LGP49771 235 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 GNAQP50148 359 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 TRAF1Q13077 416 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 PWP2Q15269 919 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 C8orf34Q49A92 452 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 TEX2Q8IWB9 1127 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 MSL3Q8N5Y2 521 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 SAMD3Q8N6K7 520 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 KIFC2Q96AC6 838 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 APBA2Q99767 749 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 LZTS2Q9BRK4 669 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 RIOX1Q9H6W3 641 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 SLC5A4Q9NY91 659 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 PTCH2Q9Y6C5 1203 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 ZSWIM8A7E2V4 1837 aa12.52□□□□□ -0.41
UBE2D3-212ENST00000502563 OLFML2BQ68BL8 750 aa12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 BLOC1S2Q6QNY1 142 aa12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 ZNF654Q8IZM8 581 aa12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 ZNF333Q96JL9 665 aa12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 ALDH8A1Q9H2A2 487 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 CTDP1Q9Y5B0 961 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-212ENST00000502563 DNAJC25-GNG10A0A024R161 153 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 FCER1AP12319 257 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 RPS6KB1P23443 525 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 GRK4P32298 578 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 GHRHRQ02643 423 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 SLC9C1Q4G0N8 1177 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 APOA5Q6Q788 366 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 RUFY3Q7L099 469 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 RGS22Q8NE09 1264 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 JAKMIP1Q96N16 626 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 NRBP1Q9UHY1 535 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 GABRQQ9UN88 632 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-212ENST00000502563 PFASO15067 1338 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 FRMPD2Q68DX3 1309 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 ADCY3O60266 1144 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 HMGCRP04035 888 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 ADORA2AP29274 412 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 KCTD2Q14681 263 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 MAP3K21Q5TCX8 1036 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 TTBK2Q6IQ55 1244 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 RASGRP2Q7LDG7 609 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 CTCFLQ8NI51 663 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 ACAD9Q9H845 621 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 SENP2Q9HC62 589 aa12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 MAP3K20Q9NYL2 800 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-212ENST00000502563 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 ZBTB5O15062 677 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 PEX10O60683 326 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 CASTP20810 708 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 UBXN2AP68543 259 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 PLS1Q14651 629 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 STAG2Q8N3U4 1231 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 FANCBQ8NB91 859 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 JMJD4Q9H9V9 463 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 CWC22Q9HCG8 908 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 GPCPD1Q9NPB8 672 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 RIPK3Q9Y572 518 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
UBE2D3-212ENST00000502563 ABCB11O95342 1321 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 GOLGA8HP0CJ92 632 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 SLC16A2P36021 539 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 CDC37Q16543 378 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 MMP19Q99542 508 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 CCPG1Q9ULG6 757 aa12.47□□□□□ -0.41
UBE2D3-212ENST00000502563 CENPFP49454 3210 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms