RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 CCDC122Q5T0U0 273 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 DNAJC7Q99615 494 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 GUCA1BQ9UMX6 200 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 EYA2O00167 538 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 FOXN1O15353 648 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 XBP1P17861 261 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 COPB1P53618 953 aaKnown RBP12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 CDK17Q00537 523 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 TTF1Q15361 905 aaPredicted RBP12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 HSP90AA4PQ58FG1 418 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 WLSQ5T9L3 541 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 KDM7AQ6ZMT4 941 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 TMTC2Q8N394 836 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 NOC3LQ8WTT2 800 aaKnown RBP12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 SLF1Q9BQI6 1058 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 EPN3Q9H201 632 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 LUC7L2Q9Y383 392 aaKnown RBP12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 TIAM2Q8IVF5 1701 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 A0A087WZG4 1122 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 PPFIA3O75145 1194 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 DEXIO95424 95 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 CASP7P55210 303 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 DPYDQ12882 1025 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 KRT31Q15323 416 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 DALRD3Q5D0E6 543 aaKnown RBP12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 ARMC9Q7Z3E5 817 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 KIAA1328Q86T90 577 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 FMNL3Q8IVF7 1028 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 CD302Q8IX05 232 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 TRIM58Q8NG06 486 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 VEZTQ9HBM0 779 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 CAPN11Q9UMQ6 739 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 NDUFB9Q9Y6M9 179 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 ANKRD65E5RJM6 399 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 H7C1W4 665 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 TCP1P17987 556 aaKnown RBP12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 ELF1P32519 619 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 PRELPP51888 382 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 RASSF7Q02833 373 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 CRYMQ14894 314 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 TCP11X2Q5H9J9 407 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 C9orf131Q5VYM1 1079 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 FBXW10Q5XX13 1052 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 PLBD2Q8NHP8 589 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 TBC1D22AQ8WUA7 517 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 PAGE5Q96GU1 130 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 PLEKHA4Q9H4M7 779 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 VCPKMTQ9H867 229 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 CNNM2Q9H8M5 875 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 MCM8Q9UJA3 840 aa12.29□□□□□ -0.44
AC055717.1-201ENST00000502221 UBN2Q6ZU65 1347 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 CAMTA2O94983 1202 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 CHGBP05060 677 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 EEF1GP26641 437 aaKnown RBP12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 SLC8A1P32418 973 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 ACTN3Q08043 901 aaPredicted RBP12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 ALX1Q15699 326 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 MEA1Q16626 185 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 LMBR1LQ6UX01 489 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 NFXL1Q6ZNB6 911 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 DIS3L2Q8IYB7 885 aaKnown RBP12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 PURBQ96QR8 312 aaKnown RBP12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 NMRK2Q9NPI5 230 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 KLC4Q9NSK0 619 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 GJB4Q9NTQ9 266 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 CEP126Q9P2H0 1117 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 TSKSQ9UJT2 592 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 SLC12A7Q9Y666 1083 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 SLX4Q8IY92 1834 aa12.28□□□□□ -0.44
AC055717.1-201ENST00000502221 ARFGEF2Q9Y6D5 1785 aa12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 FER1L6Q2WGJ9 1857 aa12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 ATP1A1P05023 1023 aaKnown RBP12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 TOB1P50616 345 aaPredicted RBP12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 VAV2P52735 878 aa12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 PAK1Q13153 545 aa12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 SND1Q7KZF4 910 aaKnown RBP eCLIP12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 MREGQ8N565 214 aa12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 EIF1ADQ8N9N8 165 aaKnown RBP12.27□□□□□ -0.44
AC055717.1-201ENST00000502221 A0A1B0GUA9 196 aa12.27□□□□□ -0.45
AC055717.1-201ENST00000502221 TRIM75PA6NK02 468 aa12.27□□□□□ -0.45
AC055717.1-201ENST00000502221 HMGB1P1B2RPK0 211 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms