RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 ATP1A2P50993 1020 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 FKBP1AP62942 108 aaKnown RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 RELBQ01201 579 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 AKAP17AQ02040 695 aaKnown RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 CLN3Q13286 438 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 GNL2Q13823 731 aaKnown RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 PPP2R5BQ15173 497 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 RTN1Q16799 776 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 CDC37L1Q7L3B6 337 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 ZNF384Q8TF68 577 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 TGFBRAP1Q8WUH2 860 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 ARID3AQ99856 593 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 MTFR1LQ9H019 292 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 ZSCAN16Q9H4T2 348 aaPredicted RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 ZNF395Q9H8N7 513 aaPredicted RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 DBNDD1Q9H9R9 158 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 LY9Q9HBG7 655 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 ORC3Q9UBD5 711 aaPredicted RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 MTMR6Q9Y217 621 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 ZDHHC9Q9Y397 364 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 FOCADQ5VW36 1801 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 NID2Q14112 1375 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 FLT1P17948 1338 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 STK36Q9NRP7 1315 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 FIBPO43427 364 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 C21orf2O43822 256 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 PRPF40AO75400 957 aaKnown RBP8.11□□□□□ -1.11
MED28-202ENST00000499786 DDAH1O94760 285 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 ZBTB7AO95365 584 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 INHAP05111 366 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 HLA-DOAP06340 250 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
MED28-202ENST00000499786 SSRP1Q08945 709 aaKnown RBP8.11□□□□□ -1.11
MED28-202ENST00000499786 KIAA2012Q0VF49 1180 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
MED28-202ENST00000499786 AOC3Q16853 763 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 KLHL40Q2TBA0 621 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 FOXD4L6Q3SYB3 417 aaPredicted RBP8.11□□□□□ -1.11
MED28-202ENST00000499786 STRIP1Q5VSL9 837 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 OLFM4Q6UX06 510 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 FOXD4L3Q6VB84 417 aaPredicted RBP8.11□□□□□ -1.11
MED28-202ENST00000499786 MAPKAPK5Q8IW41 473 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 ZNF654Q8IZM8 581 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 NUP133Q8WUM0 1156 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 C8orf76Q96K31 380 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
MED28-202ENST00000499786 ARHGEF10LQ9HCE6 1279 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 RBM28Q9NW13 759 aaKnown RBP8.11□□□□□ -1.11
MED28-202ENST00000499786 TMOD2Q9NZR1 351 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 ZSWIM5Q9P217 1185 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 DAGLAQ9Y4D2 1042 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 MYH1P12882 1939 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 CDK5RAP2Q96SN8 1893 aa8.11□□□□□ -1.11
MED28-202ENST00000499786 CYP2D7A0A087X1C5 515 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 GOLGA6L4A6NEF3 574 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L15C9J2P7 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L10C9JJH3 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L13C9JLJ4 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L11C9JVI0 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L18D6R9N7 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L22D6RA61 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L17D6RBQ6 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L19D6RCP7 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L20D6RJB6 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 PRDM1O75626 825 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 TSPY3P0CV98 308 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 TSPY8P0CW00 308 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 DPEP1P16444 411 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 XBP1P17861 261 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 KIF5BP33176 963 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 IARSP41252 1262 aaKnown RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 GDF10P55107 478 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 TGFB2P61812 414 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 USP17L24Q0WX57 530 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 C12orf60Q5U649 245 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 HHIPL2Q6UWX4 724 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 TTC6Q86TZ1 520 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 FERMT3Q86UX7 667 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 RAB11FIP4Q86YS3 637 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 NIM1KQ8IY84 436 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 ZNF444Q8N0Y2 327 aaPredicted RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 RGS22Q8NE09 1264 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 CTCFLQ8NI51 663 aaPredicted RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 IGDCC4Q8TDY8 1250 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 ZNF396Q96N95 335 aaPredicted RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 PSMD1Q99460 953 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 ZKSCAN3Q9BRR0 538 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 SCAND2PQ9GZW5 306 aaPredicted RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 VPS33BQ9H267 617 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 KAT14Q9H8E8 782 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 PIM2Q9P1W9 311 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 PPP1R1BQ9UD71 204 aaPredicted RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 SAP30BPQ9UHR5 308 aaKnown RBP8.1□□□□□ -1.11
MED28-202ENST00000499786 HDAC9Q9UKV0 1011 aa8.1□□□□□ -1.11
MED28-202ENST00000499786 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms