RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 MUC3AQ02505 3323 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 ARVCFO00192 962 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 PRDM1O75626 825 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 TJAP1Q5JTD0 557 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 GNASQ5JWF2 1037 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 RASIP1Q5U651 963 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 CCDC129Q6ZRS4 1044 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 ZNF365Q70YC5 407 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 ARMCX2Q7L311 632 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 PPM1EQ8WY54 764 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 PPP1R12CQ9BZL4 782 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 CHD7Q9P2D1 2997 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 REV3LO60673 3130 aa17.52■□□□□ 0.4
SEC61A1-207ENST00000498837 A0A0U1RQG5 324 aaPredicted RBP17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 CTAGE5O15320 804 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 BEX3Q00994 111 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 GIMAP6Q6P9H5 292 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 FAM126BQ8IXS8 530 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 CCDC144CPQ8IYA2 1237 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 MKL1Q969V6 931 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 CEP95Q96GE4 821 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 KATNBL1Q9H079 304 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 PRDM12Q9H4Q4 367 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 SPC25Q9HBM1 224 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 FEM1BQ9UK73 627 aa17.51■□□□□ 0.39
SEC61A1-207ENST00000498837 SCN5AQ14524 2016 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 CYP2C18P33260 490 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 ZNF444Q8N0Y2 327 aaPredicted RBP17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 MIER1Q8N108 512 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 LRRC47Q8N1G4 583 aaKnown RBP17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 TMEM199Q8N511 208 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 CHST13Q8NET6 341 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 GAS2L1Q99501 681 aaPredicted RBP17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 MTMR4Q9NYA4 1195 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 FBXO40Q9UH90 709 aa17.5■□□□□ 0.39
SEC61A1-207ENST00000498837 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
SEC61A1-207ENST00000498837 CD4P01730 458 aa17.49■□□□□ 0.39
SEC61A1-207ENST00000498837 CCDC174Q6PII3 467 aa17.49■□□□□ 0.39
SEC61A1-207ENST00000498837 KBTBD3Q8NAB2 608 aa17.49■□□□□ 0.39
SEC61A1-207ENST00000498837 APPBP2Q92624 585 aa17.49■□□□□ 0.39
SEC61A1-207ENST00000498837 ECHDC1Q9NTX5 307 aa17.49■□□□□ 0.39
SEC61A1-207ENST00000498837 ASTN1O14525 1302 aa17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 TLR3O15455 904 aaKnown RBP17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 GPAA1O43292 621 aa17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 PTGS1P23219 599 aa17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 OAZ1P54368 228 aa17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 TNFAIP2Q03169 654 aa17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 CHMP4CQ96CF2 233 aa17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 CXXC1Q9P0U4 656 aaPredicted RBP17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 DDX49Q9Y6V7 483 aaKnown RBP17.48■□□□□ 0.39
SEC61A1-207ENST00000498837 UMODL1Q5DID0 1318 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 SOWAHBA6NEL2 793 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 M0R2C6 588 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 TNFRSF10AO00220 468 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 RNF113AO15541 343 aaKnown RBP17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 TTLL1O95922 423 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 APPP05067 770 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 BMP3P12645 472 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 TDO2P48775 406 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 NKX3-2P78367 333 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 ADGRE1Q14246 886 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 TSHZ3Q63HK5 1081 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 PSRC1Q6PGN9 363 aaPredicted RBP17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 CXCL17Q6UXB2 119 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 NOL8Q76FK4 1167 aaKnown RBP17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 SLC43A3Q8NBI5 491 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 GMCL1P1Q8NEA9 526 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 AGBL1Q96MI9 1066 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 IL23AQ9NPF7 189 aa17.47■□□□□ 0.39
SEC61A1-207ENST00000498837 TRIP12Q14669 1992 aaPredicted RBP17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 TRANK1O15050 2925 aa17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 CCDC85BQ15834 202 aaPredicted RBP17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 IFNL3Q8IZI9 196 aa17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 HERVK_113Q902F9 699 aa17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 NKX2-4Q9H2Z4 354 aa17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 CHMP4BQ9H444 224 aaKnown RBP17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 ACAD9Q9H845 621 aa17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 GNEQ9Y223 722 aaKnown RBP17.46■□□□□ 0.39
SEC61A1-207ENST00000498837 ZNF536O15090 1300 aa17.46■□□□□ 0.38
SEC61A1-207ENST00000498837 PATL2C9JE40 543 aaKnown RBP17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 FGBP02675 491 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 AKNAD1Q5T1N1 836 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 TLK2Q86UE8 772 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 PDGFCQ9NRA1 345 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms