RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 ACLYP53396 1101 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 PDE1AP54750 535 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 CNTN2Q02246 1040 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 ACVR2BQ13705 512 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 SHHQ15465 462 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
LSAMP-206ENST00000498645 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 ARMCX2Q7L311 632 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 CHURC1Q8WUH1 139 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 STAG1Q8WVM7 1258 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 FGD4Q96M96 766 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 ACAD9Q9H845 621 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 STARD7Q9NQZ5 370 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 A0A0C4DFX4 3053 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 MYADML2A6NDP7 307 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 ADCY6O43306 1168 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
LSAMP-206ENST00000498645 KCNA10Q16322 511 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 CCDC144BQ3MJ40 725 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 C1orf53Q5VUE5 145 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 NOL8Q76FK4 1167 aaKnown RBP13.06□□□□□ -0.32
LSAMP-206ENST00000498645 ZNF467Q7Z7K2 595 aaPredicted RBP13.06□□□□□ -0.32
LSAMP-206ENST00000498645 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
LSAMP-206ENST00000498645 LRRC37A2A6NM11 1700 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 DUSP11O75319 330 aaKnown RBP13.05□□□□□ -0.32
LSAMP-206ENST00000498645 FDX1P10109 184 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 RAG1P15918 1043 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 HAND2P61296 217 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 IRX5P78411 483 aaPredicted RBP13.05□□□□□ -0.32
LSAMP-206ENST00000498645 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 RCSD1Q6JBY9 416 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 TRERF1Q96PN7 1200 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 TSEN34Q9BSV6 310 aaKnown RBP13.05□□□□□ -0.32
LSAMP-206ENST00000498645 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 SPC25Q9HBM1 224 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 A1CFQ9NQ94 594 aaKnown RBP13.05□□□□□ -0.32
LSAMP-206ENST00000498645 TMEM39AQ9NV64 488 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 PRR12Q9ULL5 1215 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 STXBP5LQ9Y2K9 1186 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
LSAMP-206ENST00000498645 ZNF536O15090 1300 aa13.05□□□□□ -0.32
LSAMP-206ENST00000498645 MOXD2PA6NHM9 499 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 ORC4O43929 436 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 ITGB8P26012 769 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 SLC16A2P36021 539 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
LSAMP-206ENST00000498645 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 ZNF697Q5TEC3 545 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 NSMFQ6X4W1 530 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.04□□□□□ -0.32
LSAMP-206ENST00000498645 ZNF589Q86UQ0 364 aaPredicted RBP13.04□□□□□ -0.32
LSAMP-206ENST00000498645 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 CCPG1Q9ULG6 757 aa13.04□□□□□ -0.32
LSAMP-206ENST00000498645 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
LSAMP-206ENST00000498645 LCTP09848 1927 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 DCDC2CA8MYV0 355 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 FGAP02671 866 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 ASGR1P07306 291 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 TKFCQ3LXA3 575 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 FAM133AQ8N9E0 248 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 PCSK9Q8NBP7 692 aaKnown RBP13.03□□□□□ -0.32
LSAMP-206ENST00000498645 KLHDC9Q8NEP7 349 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
LSAMP-206ENST00000498645 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
LSAMP-206ENST00000498645 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.02□□□□□ -0.33
LSAMP-206ENST00000498645 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 KIAA0355O15063 1070 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 PLA2G6O60733 806 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
LSAMP-206ENST00000498645 CST5P28325 142 aaPredicted RBP13.02□□□□□ -0.33
LSAMP-206ENST00000498645 EPHB4P54760 987 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 BEX3Q00994 111 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 TNFAIP2Q03169 654 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 FPGSQ05932 587 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 FAAP100Q0VG06 881 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 ALX1Q15699 326 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 CCSAPQ6IQ19 270 aaPredicted RBP13.02□□□□□ -0.33
LSAMP-206ENST00000498645 GUCD1Q96NT3 240 aa13.02□□□□□ -0.33
LSAMP-206ENST00000498645 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms