RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 ANAPC4Q9UJX5 808 aa11.71□□□□□ -0.53
RNF8-208ENST00000498460 PHF24Q9UPV7 400 aa11.71□□□□□ -0.53
RNF8-208ENST00000498460 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
RNF8-208ENST00000498460 CUL9Q8IWT3 2517 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 LCTP09848 1927 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 SNAI1O95863 264 aaPredicted RBP11.7□□□□□ -0.54
RNF8-208ENST00000498460 TLE2Q04725 743 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 ACVR2BQ13705 512 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 SNX17Q15036 470 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 ALX1Q15699 326 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 RRP12Q5JTH9 1297 aaKnown RBP11.7□□□□□ -0.54
RNF8-208ENST00000498460 RCSD1Q6JBY9 416 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 Q7L0L9 218 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 RWDD1Q9H446 243 aaPredicted RBP11.7□□□□□ -0.54
RNF8-208ENST00000498460 ACAD9Q9H845 621 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 IL17RBQ9NRM6 502 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
RNF8-208ENST00000498460 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
RNF8-208ENST00000498460 EYSQ5T1H1 3165 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 SYNRGQ9UMZ2 1314 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 A0A1W2PQ45 241 aaPredicted RBP11.69□□□□□ -0.54
RNF8-208ENST00000498460 A0A1W2PQY0 241 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 POTEB2H3BUK9 544 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 ORC4O43929 436 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 PLA2G6O60733 806 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 DUSP11O75319 330 aaKnown RBP11.69□□□□□ -0.54
RNF8-208ENST00000498460 FGAP02671 866 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 ALAS1P13196 640 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 NMIQ13287 307 aaPredicted RBP11.69□□□□□ -0.54
RNF8-208ENST00000498460 CCDC96Q2M329 555 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 C1orf53Q5VUE5 145 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 CCDC174Q6PII3 467 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNF8-208ENST00000498460 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 TICAM2Q86XR7 235 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 NUP133Q8WUM0 1156 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 BADQ92934 168 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 TRERF1Q96PN7 1200 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 TSEN34Q9BSV6 310 aaKnown RBP11.69□□□□□ -0.54
RNF8-208ENST00000498460 SPC25Q9HBM1 224 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 PDLIM7Q9NR12 457 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 RNF146Q9NTX7 359 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 TACC3Q9Y6A5 838 aa11.69□□□□□ -0.54
RNF8-208ENST00000498460 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
RNF8-208ENST00000498460 ADAMTS4O75173 837 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 CLTBP09497 229 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 C6orf222P0C671 652 aaPredicted RBP11.68□□□□□ -0.54
RNF8-208ENST00000498460 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
RNF8-208ENST00000498460 ACLYP53396 1101 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 MFAP1P55081 439 aaKnown RBP11.68□□□□□ -0.54
RNF8-208ENST00000498460 SNAP25P60880 206 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 CNTN2Q02246 1040 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 KCNA10Q16322 511 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 TKFCQ3LXA3 575 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 SLC17A8Q8NDX2 589 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 VTI1AQ96AJ9 217 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 STARD7Q9NQZ5 370 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 PRR12Q9ULL5 1215 aa11.68□□□□□ -0.54
RNF8-208ENST00000498460 CDH23Q9H251 3354 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 ZNF536O15090 1300 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 TRIM43BA6NCK2 446 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 ASB14A6NK59 587 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 DCDC2CA8MYV0 355 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 FGRP09769 529 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
RNF8-208ENST00000498460 RAG1P15918 1043 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 HAND2P61296 217 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 SHHQ15465 462 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 MFSD6Q6ZSS7 791 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 NOL8Q76FK4 1167 aaKnown RBP11.67□□□□□ -0.54
RNF8-208ENST00000498460 RASGRP2Q7LDG7 609 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 ZNF589Q86UQ0 364 aaPredicted RBP11.67□□□□□ -0.54
RNF8-208ENST00000498460 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
RNF8-208ENST00000498460 KLHDC9Q8NEP7 349 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 TRIM43Q96BQ3 446 aaPredicted RBP11.67□□□□□ -0.54
RNF8-208ENST00000498460 FGD4Q96M96 766 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 A1CFQ9NQ94 594 aaKnown RBP11.67□□□□□ -0.54
RNF8-208ENST00000498460 TMEM39AQ9NV64 488 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 CCPG1Q9ULG6 757 aa11.67□□□□□ -0.54
RNF8-208ENST00000498460 ZMYM6O95789 1325 aa11.66□□□□□ -0.54
RNF8-208ENST00000498460 SLC16A2P36021 539 aa11.66□□□□□ -0.54
RNF8-208ENST00000498460 NSMFQ6X4W1 530 aa11.66□□□□□ -0.54
RNF8-208ENST00000498460 CHD1LQ86WJ1 897 aa11.66□□□□□ -0.54
RNF8-208ENST00000498460 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
RNF8-208ENST00000498460 GLT1D1Q96MS3 346 aa11.66□□□□□ -0.54
RNF8-208ENST00000498460 TMEM47Q9BQJ4 181 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms