RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 FGD4Q96M96 766 aa7.4□□□□□ -1.22
SSR3-209ENST00000498205 SLC12A9Q9BXP2 914 aa7.4□□□□□ -1.22
SSR3-209ENST00000498205 CGGBP1Q9UFW8 167 aaPredicted RBP7.4□□□□□ -1.22
SSR3-209ENST00000498205 SUSD2Q9UGT4 822 aa7.4□□□□□ -1.22
SSR3-209ENST00000498205 MINPP1Q9UNW1 487 aa7.4□□□□□ -1.22
SSR3-209ENST00000498205 A0A1W2PQ45 241 aaPredicted RBP7.39□□□□□ -1.23
SSR3-209ENST00000498205 A0A1W2PQY0 241 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 RBAK-RBAKDNI3L0D1 243 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 SUSD5O60279 629 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 TBC1D8O95759 1140 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 SLC14A2Q15849 920 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 HLA-DQA1Q5Y7H0 255 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 SREK1Q8WXA9 508 aaKnown RBP7.39□□□□□ -1.23
SSR3-209ENST00000498205 ZNF669Q96BR6 464 aaPredicted RBP7.39□□□□□ -1.23
SSR3-209ENST00000498205 ZDHHC15Q96MV8 337 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 G6PC3Q9BUM1 346 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 AKT3Q9Y243 479 aa7.39□□□□□ -1.23
SSR3-209ENST00000498205 WTIPA6NIX2 430 aaPredicted RBP7.38□□□□□ -1.23
SSR3-209ENST00000498205 NRDCO43847 1150 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 GSTM1P09488 218 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 PPP2R5DQ14738 602 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 RCSD1Q6JBY9 416 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 GALNT18Q6P9A2 607 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 ADCY4Q8NFM4 1077 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 FCRL3Q96P31 734 aaPredicted RBP7.38□□□□□ -1.23
SSR3-209ENST00000498205 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 ERVK13-1Q9NX77 482 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 SIRPGQ9P1W8 387 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 EMC9Q9Y3B6 208 aa7.38□□□□□ -1.23
SSR3-209ENST00000498205 IQCA1LA6NCM1 817 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 FADS2P1A8MWK0 482 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 FGF10O15520 208 aaPredicted RBP7.37□□□□□ -1.23
SSR3-209ENST00000498205 GJB6O95452 261 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 CD3EP07766 207 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
SSR3-209ENST00000498205 RTP1P59025 263 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 RBL2Q08999 1139 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 SV2CQ496J9 727 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 RTP2Q5QGT7 225 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 CEP128Q6ZU80 1094 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 TRIM59Q8IWR1 403 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 ZNF513Q8N8E2 541 aaPredicted RBP7.37□□□□□ -1.23
SSR3-209ENST00000498205 ST13P5Q8NFI4 369 aaPredicted RBP7.37□□□□□ -1.23
SSR3-209ENST00000498205 SLC6A17Q9H1V8 727 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 CRTAC1Q9NQ79 661 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 LRP2BPQ9P2M1 347 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 BACE2Q9Y5Z0 518 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 MYO15BQ96JP2 1530 aa7.37□□□□□ -1.23
SSR3-209ENST00000498205 AURKAO14965 403 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 TXKP42681 527 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 CORO7P57737 925 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 PPP1R14AQ96A00 147 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 CCDC140Q96MF4 163 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 FMNL2Q96PY5 1086 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 TAF6LQ9Y6J9 622 aa7.36□□□□□ -1.23
SSR3-209ENST00000498205 SEPHS1P49903 392 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 MPZL3Q6UWV2 235 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 JAMLQ86YT9 394 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 IRF2BP1Q8IU81 584 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 SGSM3Q96HU1 749 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 PTCHD1Q96NR3 888 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 SP110Q9HB58 689 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 CYP26B1Q9NR63 512 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 APEX2Q9UBZ4 518 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 GPR160Q9UJ42 338 aa7.35□□□□□ -1.23
SSR3-209ENST00000498205 C2orf71A6NGG8 1288 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 USP2O75604 605 aaPredicted RBP7.34□□□□□ -1.23
SSR3-209ENST00000498205 ARL4AP40617 200 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 ERVFC1P60507 584 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 LAPTM5Q13571 262 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 FYB2Q5VWT5 728 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 LRP10Q7Z4F1 713 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 SLCO6A1Q86UG4 719 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 MRGPRX3Q96LB0 322 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 EBF1Q9UH73 591 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 GPR55Q9Y2T6 319 aaPredicted RBP7.34□□□□□ -1.23
SSR3-209ENST00000498205 YBX2Q9Y2T7 364 aaKnown RBP7.34□□□□□ -1.23
SSR3-209ENST00000498205 CARMIL2Q6F5E8 1435 aa7.34□□□□□ -1.23
SSR3-209ENST00000498205 A0A1W2PQ27 194 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 A0A1W2PQ64 194 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 A0A1W2PQC6 194 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 A0A1W2PQD8 194 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 B2RBV5 119 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 KCNH1O95259 989 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 CPP00450 1065 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 PAMP19021 973 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 HOXC12P31275 282 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 HSF5Q4G112 596 aaPredicted RBP7.33□□□□□ -1.24
SSR3-209ENST00000498205 MRM1Q6IN84 353 aaKnown RBP7.33□□□□□ -1.24
SSR3-209ENST00000498205 NLRX1Q86UT6 975 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 CELF2-AS1Q8N7Q2 184 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 MICAL1Q8TDZ2 1067 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 CCDC113Q9H0I3 377 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 NKX2-4Q9H2Z4 354 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 ST7Q9NRC1 585 aa7.33□□□□□ -1.24
SSR3-209ENST00000498205 MSRB2Q9Y3D2 182 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms