RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 USP40Q9NVE5 1235 aa22.88■■□□□ 1.25
ACTN4-208ENST00000497637 IFNAR1P17181 557 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 RXRAP19793 462 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 KRT85P78386 507 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 IFIT1BQ5T764 474 aaKnown RBP22.87■■□□□ 1.25
ACTN4-208ENST00000497637 FANCBQ8NB91 859 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 GPT2Q8TD30 523 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 SOCS4Q8WXH5 440 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 FAM122AQ96E09 287 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 C8orf76Q96K31 380 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 MYL10Q9BUA6 226 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 ZNF287Q9HBT7 754 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 TCP11L1Q9NUJ3 509 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 SAP30BPQ9UHR5 308 aaKnown RBP22.87■■□□□ 1.25
ACTN4-208ENST00000497637 ATRNL1Q5VV63 1379 aa22.87■■□□□ 1.25
ACTN4-208ENST00000497637 ENTPD3O75355 529 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 CALM1P0DP23 149 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 CALM2P0DP24 149 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 CALM3P0DP25 149 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 FOSL2P15408 326 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 NCLP19338 710 aaKnown RBP22.86■■□□□ 1.25
ACTN4-208ENST00000497637 DEKP35659 375 aaKnown RBP22.86■■□□□ 1.25
ACTN4-208ENST00000497637 PLCD1P51178 756 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 CATIPQ7Z7H3 387 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 DYNLL2Q96FJ2 89 aa22.86■■□□□ 1.25
ACTN4-208ENST00000497637 DDAH1O94760 285 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 SMAD3P84022 425 aaKnown RBP22.85■■□□□ 1.25
ACTN4-208ENST00000497637 SSRP1Q08945 709 aaKnown RBP22.85■■□□□ 1.25
ACTN4-208ENST00000497637 FAM47AQ5JRC9 791 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 TREML2Q5T2D2 321 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 C16orf86Q6ZW13 317 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 FBXO18Q8NFZ0 1043 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 MYLIPQ8WY64 445 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 NUDT12Q9BQG2 462 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 GZF1Q9H116 711 aaPredicted RBP22.85■■□□□ 1.25
ACTN4-208ENST00000497637 MKNK2Q9HBH9 465 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 GDPD2Q9HCC8 539 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 DNAH12Q6ZR08 3092 aa22.85■■□□□ 1.25
ACTN4-208ENST00000497637 TSPY2A6NKD2 308 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 CYP2B6P20813 491 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 TFAP4Q01664 338 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 LHX8Q68G74 356 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 ATL3Q6DD88 541 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 DGKHQ86XP1 1220 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 ZSCAN29Q8IWY8 852 aaPredicted RBP22.84■■□□□ 1.25
ACTN4-208ENST00000497637 ZFPM1Q8IX07 1006 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 CCDC144CPQ8IYA2 1237 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 ZNF444Q8N0Y2 327 aaPredicted RBP22.84■■□□□ 1.25
ACTN4-208ENST00000497637 IDI2Q9BXS1 227 aa22.84■■□□□ 1.25
ACTN4-208ENST00000497637 PPFIA3O75145 1194 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 CDK8P49336 464 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 FOSBP53539 338 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 TTC6Q86TZ1 520 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 NUP133Q8WUM0 1156 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 WASF1Q92558 559 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 ALG1Q9BT22 464 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 SCAND2PQ9GZW5 306 aaPredicted RBP22.83■■□□□ 1.25
ACTN4-208ENST00000497637 RBM28Q9NW13 759 aaKnown RBP22.83■■□□□ 1.25
ACTN4-208ENST00000497637 MORF4L1Q9UBU8 362 aa22.83■■□□□ 1.25
ACTN4-208ENST00000497637 NAV1Q8NEY1 1877 aa22.83■■□□□ 1.24
ACTN4-208ENST00000497637 TMEM265A0A087WTH1 108 aa22.82■■□□□ 1.24
ACTN4-208ENST00000497637 FIBPO43427 364 aa22.82■■□□□ 1.24
ACTN4-208ENST00000497637 RASA1P20936 1047 aa22.82■■□□□ 1.24
ACTN4-208ENST00000497637 UBE2HP62256 183 aa22.82■■□□□ 1.24
ACTN4-208ENST00000497637 CRACR2BQ8N4Y2 399 aaPredicted RBP22.82■■□□□ 1.24
ACTN4-208ENST00000497637 ELP1O95163 1332 aa22.82■■□□□ 1.24
ACTN4-208ENST00000497637 GADD45BO75293 160 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-208ENST00000497637 CACNB2Q08289 660 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-208ENST00000497637 TROAPQ12815 778 aa22.81■■□□□ 1.24
ACTN4-208ENST00000497637 RCSD1Q6JBY9 416 aa22.81■■□□□ 1.24
ACTN4-208ENST00000497637 FAM173BQ6P4H8 233 aa22.81■■□□□ 1.24
ACTN4-208ENST00000497637 PHKBQ93100 1093 aa22.81■■□□□ 1.24
ACTN4-208ENST00000497637 ASCC2Q9H1I8 757 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-208ENST00000497637 NCOR1O75376 2440 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 NPM3O75607 178 aaKnown RBP22.8■■□□□ 1.24
ACTN4-208ENST00000497637 GUCY1B3Q02153 619 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 SHHQ15465 462 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 TRIM22Q8IYM9 498 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 SLC44A5Q8NCS7 719 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 NEDD1Q8NHV4 660 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 ZNF396Q96N95 335 aaPredicted RBP22.8■■□□□ 1.24
ACTN4-208ENST00000497637 SLC26A6Q9BXS9 759 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 SENP6Q9GZR1 1112 aaPredicted RBP22.8■■□□□ 1.24
ACTN4-208ENST00000497637 TTYH1Q9H313 450 aaPredicted RBP22.8■■□□□ 1.24
ACTN4-208ENST00000497637 DDX4Q9NQI0 724 aaKnown RBP22.8■■□□□ 1.24
ACTN4-208ENST00000497637 IL17RBQ9NRM6 502 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 CFAP45Q9UL16 551 aa22.8■■□□□ 1.24
ACTN4-208ENST00000497637 CDH23Q9H251 3354 aa22.79■■□□□ 1.24
ACTN4-208ENST00000497637 NMT2O60551 498 aa22.79■■□□□ 1.24
ACTN4-208ENST00000497637 GABPAQ06546 454 aa22.79■■□□□ 1.24
ACTN4-208ENST00000497637 SPP2Q13103 211 aa22.79■■□□□ 1.24
ACTN4-208ENST00000497637 ZNF280CQ8ND82 737 aa22.79■■□□□ 1.24
ACTN4-208ENST00000497637 MAP3K14Q99558 947 aa22.79■■□□□ 1.24
ACTN4-208ENST00000497637 OSBPL5Q9H0X9 879 aaPredicted RBP22.79■■□□□ 1.24
ACTN4-208ENST00000497637 TBC1D12O60347 775 aa22.78■■□□□ 1.24
ACTN4-208ENST00000497637 DEXIO95424 95 aa22.78■■□□□ 1.24
ACTN4-208ENST00000497637 TSPY3P0CV98 308 aa22.78■■□□□ 1.24
ACTN4-208ENST00000497637 TSPY8P0CW00 308 aa22.78■■□□□ 1.24
ACTN4-208ENST00000497637 MAPK4P31152 587 aa22.78■■□□□ 1.24
ACTN4-208ENST00000497637 FUT2Q10981 343 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms