RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 BLACEA4D250 179 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 F5H423 210 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 TCERG1O14776 1098 aaKnown RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 ATXN7O15265 892 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 CBFA2T2O43439 604 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 SMNDC1O75940 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 RBP3P10745 1247 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 GRIK1P39086 918 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 ALDH5A1P51649 535 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 GTF2A2P52657 109 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 USP14P54578 494 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 DSG1Q02413 1049 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 SPEM2Q0P670 501 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 LAMC2Q13753 1193 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 ODF1Q14990 250 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 ATP13A4Q4VNC1 1196 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 HYIQ5T013 277 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 LVRNQ6Q4G3 990 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 MAMDC2Q7Z304 686 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 SKAP1Q86WV1 359 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 CLASRPQ8N2M8 674 aaKnown RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 FAM43AQ8N2R8 423 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 NXPE1Q8N323 547 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 AHCYL2Q96HN2 611 aaKnown RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 MRGPRX3Q96LB0 322 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 FGD4Q96M96 766 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 NMRK2Q9NPI5 230 aa7.45□□□□□ -1.22
BRCA1-224ENST00000497488 TPX2Q9ULW0 747 aaKnown RBP7.45□□□□□ -1.22
BRCA1-224ENST00000497488 ZBTB42B2RXF5 422 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 CBX4O00257 560 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 F11P03951 625 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 HSPA6P17066 643 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 RHCEP18577 417 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 MCCP23508 829 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 DDIT3P35638 169 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 LSSP48449 732 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 RHDQ02161 417 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 MLLT1Q03111 559 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-224ENST00000497488 NTRK3Q16288 839 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 RGL3Q3MIN7 710 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 EFHC2Q5JST6 749 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 CEP135Q66GS9 1140 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 B3GNT9Q6UX72 402 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 CYFIP1Q7L576 1253 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 BVESQ8NE79 360 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 POF1BQ8WVV4 589 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 BHMTQ93088 406 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 SAGE1Q9NXZ1 904 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 SAMD15Q9P1V8 674 aa7.44□□□□□ -1.22
BRCA1-224ENST00000497488 FBXO2Q9UK22 296 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-224ENST00000497488 CECR2Q9BXF3 1484 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 DCDC2BA2VCK2 349 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 C9IYK1 514 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 ULK1O75385 1050 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 IL33O95760 270 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 CFBP00751 764 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 GHRHP01286 108 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 SLC5A1P13866 664 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 IREB2P48200 963 aaKnown RBP7.43□□□□□ -1.22
BRCA1-224ENST00000497488 SLC9A5Q14940 896 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 ELF2Q15723 593 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 LONRF1Q17RB8 773 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 JAKMIP3Q5VZ66 844 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 FIGNL1Q6PIW4 674 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 HFE2Q6ZVN8 426 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 CATIPQ7Z7H3 387 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 CYP4X1Q8N118 509 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 SNIP1Q8TAD8 396 aaKnown RBP7.43□□□□□ -1.22
BRCA1-224ENST00000497488 SMARCC1Q92922 1105 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-224ENST00000497488 ACSF2Q96CM8 615 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-224ENST00000497488 SLC30A3Q99726 388 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 CSRNP2Q9H175 543 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 EMC7Q9NPA0 242 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 DNM3Q9UQ16 869 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 WASHC2AQ641Q2 1341 aa7.43□□□□□ -1.22
BRCA1-224ENST00000497488 FAM187AA6NFU0 413 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 J3QL48 77 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 GLRX3O76003 335 aaKnown RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 CRTAMO95727 393 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 ZKSCAN1P17029 563 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 KCNA6P17658 529 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 PTPRAP18433 802 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 CCT5P48643 541 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 TNP2Q05952 138 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 ABHD17CQ6PCB6 329 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 PGM2L1Q6PCE3 622 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 FAM43BQ6ZT52 329 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 RAB44Q7Z6P3 723 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 DDX53Q86TM3 631 aaKnown RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 ACRBPQ8NEB7 543 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 NGDNQ8NEJ9 315 aaKnown RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 SLC35G2Q8TBE7 412 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 SNRNP27Q8WVK2 155 aaKnown RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 ELMO3Q96BJ8 720 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 TAAR9Q96RI9 348 aa7.42□□□□□ -1.22
BRCA1-224ENST00000497488 ZC3H12CQ9C0D7 883 aaKnown RBP7.42□□□□□ -1.22
BRCA1-224ENST00000497488 ADAM19Q9H013 955 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms