RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 KCTD2Q14681 263 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 DNAJC21Q5F1R6 531 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 PRAMEF13Q5VWM6 474 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 JAKMIP3Q5VZ66 844 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 AGMOQ6ZNB7 445 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 WDR75Q8IWA0 830 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 MYO1HQ8N1T3 1032 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 TOP6BLQ8N6T0 577 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 TBC1D22AQ8WUA7 517 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 ZNF512BQ96KM6 892 aaPredicted RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 PSMG3-AS1Q96PY0 264 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 SRCIN1Q9C0H9 1055 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 IQCGQ9H095 443 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 ZC3H7BQ9UGR2 993 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 MINPP1Q9UNW1 487 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 SHTN1A0MZ66 631 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 DYNC1I1O14576 645 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 HYAL3O43820 417 aaPredicted RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 LDHCP07864 332 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 HSP90AB1P08238 724 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 FAM163BP0C2L3 166 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 SLFN14P0C7P3 912 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 ZNF132P52740 706 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 RING1Q06587 406 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 WASHC5Q12768 1159 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 ODR4Q5SWX8 454 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 ZBTB37Q5TC79 503 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 CCDC81Q6ZN84 652 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 MORC1Q86VD1 984 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 CLEC10AQ8IUN9 316 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 CHCHD4Q8N4Q1 142 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 PRPF38AQ8NAV1 312 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 TDRD7Q8NHU6 1098 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 TAF4BQ92750 862 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 DBNDD2Q9BQY9 259 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 MIR1-1HGQ9H1L0 117 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 ADAMTS1Q9UHI8 967 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 USP25Q9UHP3 1055 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 RAD50Q92878 1312 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 CAND2O75155 1236 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 XRCC5P13010 732 aaKnown RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 TNNT1P13805 278 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 XBP1P17861 261 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 NOP2P46087 812 aaKnown RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 DUSP27Q5VZP5 1158 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 SPRED2Q7Z698 418 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 MPP4Q96JB8 637 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 IRAK4Q9NWZ3 460 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 GFRA2O00451 464 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 SLITRK5O94991 958 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 HSPA5P11021 654 aaKnown RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 CLK1P49759 484 aaKnown RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 FANCCQ00597 558 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 UBE4AQ14139 1066 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 SLBPQ14493 270 aaKnown RBP eCLIP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 RPS26P11Q5JNZ5 115 aaPredicted RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 CDKAL1Q5VV42 579 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 GK5Q6ZS86 529 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 ZNF771Q7L3S4 317 aaPredicted RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 CCDC91Q7Z6B0 441 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 TRIM74Q86UV6 250 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 TRIM73Q86UV7 250 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 ELOA2Q8IYF1 753 aaPredicted RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 NGDNQ8NEJ9 315 aaKnown RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 ANKRD24Q8TF21 1146 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 EZH1Q92800 747 aaPredicted RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 TSR2Q969E8 191 aaKnown RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 SYAP1Q96A49 352 aaPredicted RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 CCDC34Q96HJ3 373 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 RHOVQ96L33 236 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 MIPEPQ99797 713 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 CACNA2D2Q9NY47 1150 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 TMCC3Q9ULS5 477 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 PPT2Q9UMR5 302 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 POLR3KQ9Y2Y1 108 aaPredicted RBP3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 USP31Q70CQ4 1352 aa3.63□□□□□ -1.83
SNRNP48-202ENST00000496946 FAM221AA4D161 298 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 SCAMP3O14828 347 aaKnown RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CYP26A1O43174 497 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CCDC159P0C7I6 412 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 STIP1P31948 543 aaKnown RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 RAD51AP2Q09MP3 1159 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CHAF1AQ13111 956 aaPredicted RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 DCTN1Q14203 1278 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 PPP2R5AQ15172 486 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 MSMPQ1L6U9 139 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 ALDH1L2Q3SY69 923 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 ARHGEF25Q86VW2 580 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 GOLGA1Q92805 767 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 RMDN2Q96LZ7 410 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CEP89Q96ST8 783 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 SLX1AQ9BQ83 275 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 TINF2Q9BSI4 451 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 MMTAG2Q9BU76 263 aaKnown RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 OSBPL1AQ9BXW6 950 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CEP44Q9C0F1 390 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 ALDH8A1Q9H2A2 487 aaPredicted RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 TMOD4Q9NZQ9 345 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CWC15Q9P013 229 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms