RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 DDIT3P35638 169 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 GRM1Q13255 1194 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 WWC2Q6AWC2 1192 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 GPKOWQ92917 476 aaPredicted RBP eCLIP21.1■□□□□ 0.97
RGP1-202ENST00000496906 P2RX7Q99572 595 aaKnown RBP21.1■□□□□ 0.97
RGP1-202ENST00000496906 PNMA3Q9UL41 463 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 MYH6P13533 1939 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 INHBEP58166 350 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 NOGQ13253 232 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 LBX2Q6XYB7 198 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 REPS2Q8NFH8 660 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 SHISA4Q96DD7 197 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 ZIC5Q96T25 663 aa21.1■□□□□ 0.97
RGP1-202ENST00000496906 hCG_1984214I3L0E3 225 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 IGF2BP3O00425 579 aaKnown RBP eCLIP21.09■□□□□ 0.97
RGP1-202ENST00000496906 PDCP20941 246 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 HERVK_113P62684 666 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 SREBF2Q12772 1141 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 LARP1BQ659C4 914 aaKnown RBP21.09■□□□□ 0.97
RGP1-202ENST00000496906 CCDC174Q6PII3 467 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 HEATR3Q7Z4Q2 680 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 ZNF713Q8N859 430 aaPredicted RBP21.09■□□□□ 0.97
RGP1-202ENST00000496906 BARHL2Q9NY43 387 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 VPS54Q9P1Q0 977 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 ZNF536O15090 1300 aa21.09■□□□□ 0.97
RGP1-202ENST00000496906 ZBED4O75132 1171 aa21.08■□□□□ 0.97
RGP1-202ENST00000496906 KIF23Q02241 960 aaPredicted RBP21.08■□□□□ 0.97
RGP1-202ENST00000496906 TYW1BQ6NUM6 668 aa21.08■□□□□ 0.97
RGP1-202ENST00000496906 POTEEQ6S8J3 1075 aa21.08■□□□□ 0.97
RGP1-202ENST00000496906 C8orf76Q96K31 380 aa21.08■□□□□ 0.97
RGP1-202ENST00000496906 AMNQ9BXJ7 453 aa21.08■□□□□ 0.97
RGP1-202ENST00000496906 ZCCHC17Q9NP64 241 aaKnown RBP21.08■□□□□ 0.97
RGP1-202ENST00000496906 GJB4Q9NTQ9 266 aa21.08■□□□□ 0.97
RGP1-202ENST00000496906 A0A0G2JMZ2 1700 aa21.08■□□□□ 0.97
RGP1-202ENST00000496906 STXBP3O00186 592 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 ICAM1P05362 532 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 CYP2C8P10632 490 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 SYT1P21579 422 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 FOSBP53539 338 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 FBXO11Q86XK2 927 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 MB21D1Q8N884 522 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 COA7Q96BR5 231 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 SH3GLB2Q9NR46 395 aa21.07■□□□□ 0.96
RGP1-202ENST00000496906 XBP1P17861 261 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 TM4SF4P48230 202 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 OAZ1P54368 228 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 IFNL1Q8IU54 200 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 FBXO18Q8NFZ0 1043 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 PARK7Q99497 189 aaKnown RBP21.06■□□□□ 0.96
RGP1-202ENST00000496906 RAVER2Q9HCJ3 691 aaKnown RBP21.06■□□□□ 0.96
RGP1-202ENST00000496906 ZNF214Q9UL59 606 aaPredicted RBP21.06■□□□□ 0.96
RGP1-202ENST00000496906 CTDP1Q9Y5B0 961 aaPredicted RBP21.06■□□□□ 0.96
RGP1-202ENST00000496906 PCDHA1Q9Y5I3 950 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 ATP2A1O14983 1001 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 AOC2O75106 756 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 TAL1P17542 331 aaPredicted RBP21.06■□□□□ 0.96
RGP1-202ENST00000496906 TMEM132BQ14DG7 1078 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 OTUD7BQ6GQQ9 843 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 FAM177A1Q8N128 213 aaPredicted RBP21.06■□□□□ 0.96
RGP1-202ENST00000496906 RGS22Q8NE09 1264 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 GTF3C2Q8WUA4 911 aaPredicted RBP21.06■□□□□ 0.96
RGP1-202ENST00000496906 AGBL1Q96MI9 1066 aa21.06■□□□□ 0.96
RGP1-202ENST00000496906 WDR33Q9C0J8 1336 aaKnown RBP21.05■□□□□ 0.96
RGP1-202ENST00000496906 STX6O43752 255 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 NAPAP54920 295 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 GUCY1B3Q02153 619 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 TRAF1Q13077 416 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 TRIM29Q14134 588 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 USH1GQ495M9 461 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 KRT40Q6A162 431 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 PPP1R18Q6NYC8 613 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 CCDC148Q8NFR7 591 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 PNMA2Q9UL42 364 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 CCPG1Q9ULG6 757 aa21.05■□□□□ 0.96
RGP1-202ENST00000496906 CNMDO75829 334 aa21.04■□□□□ 0.96
RGP1-202ENST00000496906 PKP1Q13835 747 aa21.04■□□□□ 0.96
RGP1-202ENST00000496906 SMCR8Q8TEV9 937 aaPredicted RBP21.04■□□□□ 0.96
RGP1-202ENST00000496906 CCDC12Q8WUD4 166 aaPredicted RBP21.04■□□□□ 0.96
RGP1-202ENST00000496906 PHF20Q9BVI0 1012 aa21.04■□□□□ 0.96
RGP1-202ENST00000496906 BTBD7Q9P203 1132 aa21.04■□□□□ 0.96
RGP1-202ENST00000496906 KCNJ14Q9UNX9 436 aa21.04■□□□□ 0.96
RGP1-202ENST00000496906 COL11A1P12107 1806 aaPredicted RBP21.04■□□□□ 0.96
RGP1-202ENST00000496906 H3BQV1 296 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 PDIA4P13667 645 aaKnown RBP21.03■□□□□ 0.96
RGP1-202ENST00000496906 VEGFBP49765 207 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 IFFO2Q5TF58 517 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 REM2Q8IYK8 340 aaPredicted RBP21.03■□□□□ 0.96
RGP1-202ENST00000496906 TEX13BQ9BXU2 312 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 TXNRD2Q9NNW7 524 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 RBPJLQ9UBG7 517 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 CIZ1Q9ULV3 898 aaPredicted RBP21.03■□□□□ 0.96
RGP1-202ENST00000496906 MTMR6Q9Y217 621 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 RABGAP1Q9Y3P9 1069 aa21.03■□□□□ 0.96
RGP1-202ENST00000496906 ABCB11O95342 1321 aa21.02■□□□□ 0.96
RGP1-202ENST00000496906 ESYT2A0FGR8 921 aa21.02■□□□□ 0.96
RGP1-202ENST00000496906 VPS37CA5D8V6 355 aaPredicted RBP21.02■□□□□ 0.96
RGP1-202ENST00000496906 PEX10O60683 326 aa21.02■□□□□ 0.96
RGP1-202ENST00000496906 MMP1P03956 469 aa21.02■□□□□ 0.96
RGP1-202ENST00000496906 NPY5RQ15761 445 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms