RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 SNHG28P0DPA3 235 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 BMP2KLQ5H9B9 411 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
COMMD3-214ENST00000496071 SYDE2Q5VT97 1194 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 KIAA1211Q6ZU35 1233 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 TRPV1Q8NER1 839 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 CCDC136Q96JN2 1154 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 UBAC1Q9BSL1 405 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 ACAD9Q9H845 621 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 KAT14Q9H8E8 782 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 GPCPD1Q9NPB8 672 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 PNMA2Q9UL42 364 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 FRMPD3Q5JV73 1810 aa20.01■□□□□ 0.79
COMMD3-214ENST00000496071 SEPT4O43236 478 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 CYP21A2P08686 494 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 ZNF543Q08ER8 600 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 TTBK2Q6IQ55 1244 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 RASGRP2Q7LDG7 609 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 ZNF467Q7Z7K2 595 aaPredicted RBP20■□□□□ 0.79
COMMD3-214ENST00000496071 PNMA1Q8ND90 353 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 MAP4K1Q92918 833 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 AGBL1Q96MI9 1066 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 RANBP17Q9H2T7 1088 aaKnown RBP20■□□□□ 0.79
COMMD3-214ENST00000496071 NR2E3Q9Y5X4 410 aa20■□□□□ 0.79
COMMD3-214ENST00000496071 FRMPD2Q68DX3 1309 aaPredicted RBP20■□□□□ 0.79
COMMD3-214ENST00000496071 ICAM1P05362 532 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 NEFLP07196 543 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 ALAS1P13196 640 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 SLC16A2P36021 539 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 MNX1P50219 401 aaPredicted RBP19.99■□□□□ 0.79
COMMD3-214ENST00000496071 CCDC174Q6PII3 467 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 ENAHQ8N8S7 591 aaPredicted RBP19.99■□□□□ 0.79
COMMD3-214ENST00000496071 DIS3LQ8TF46 1054 aaKnown RBP19.99■□□□□ 0.79
COMMD3-214ENST00000496071 TRERF1Q96PN7 1200 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 C11orf49Q9H6J7 331 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 HOMER2Q9NSB8 354 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 RNF146Q9NTX7 359 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 TNKSO95271 1327 aa19.99■□□□□ 0.79
COMMD3-214ENST00000496071 PRAMEF19Q5SWL8 479 aa19.98■□□□□ 0.79
COMMD3-214ENST00000496071 MAMDC4Q6UXC1 1216 aa19.98■□□□□ 0.79
COMMD3-214ENST00000496071 CCPG1Q9ULG6 757 aa19.98■□□□□ 0.79
COMMD3-214ENST00000496071 CNPY2Q9Y2B0 182 aa19.98■□□□□ 0.79
COMMD3-214ENST00000496071 MKI67P46013 3256 aaKnown RBP19.98■□□□□ 0.79
COMMD3-214ENST00000496071 PFASO15067 1338 aa19.98■□□□□ 0.79
COMMD3-214ENST00000496071 SYNGAP1Q96PV0 1343 aa19.98■□□□□ 0.79
COMMD3-214ENST00000496071 EVI5O60447 810 aa19.97■□□□□ 0.79
COMMD3-214ENST00000496071 SNAP25P60880 206 aa19.97■□□□□ 0.79
COMMD3-214ENST00000496071 IFIT1BQ5T764 474 aaKnown RBP19.97■□□□□ 0.79
COMMD3-214ENST00000496071 RALYLQ86SE5 291 aaKnown RBP19.97■□□□□ 0.79
COMMD3-214ENST00000496071 ARRDC4Q8NCT1 418 aa19.97■□□□□ 0.79
COMMD3-214ENST00000496071 NCOA7Q8NI08 942 aa19.97■□□□□ 0.79
COMMD3-214ENST00000496071 ESYT1Q9BSJ8 1104 aa19.97■□□□□ 0.79
COMMD3-214ENST00000496071 E7EWF7 191 aa19.96■□□□□ 0.79
COMMD3-214ENST00000496071 ASPRV1Q53RT3 343 aa19.96■□□□□ 0.79
COMMD3-214ENST00000496071 A1CFQ9NQ94 594 aaKnown RBP19.96■□□□□ 0.79
COMMD3-214ENST00000496071 RBM8AQ9Y5S9 174 aaKnown RBP19.96■□□□□ 0.79
COMMD3-214ENST00000496071 ERICH2A1L162 156 aa19.95■□□□□ 0.78
COMMD3-214ENST00000496071 POTEB2H3BUK9 544 aa19.95■□□□□ 0.78
COMMD3-214ENST00000496071 DNM1LO00429 736 aa19.95■□□□□ 0.78
COMMD3-214ENST00000496071 COL6A1P12109 1028 aa19.95■□□□□ 0.78
COMMD3-214ENST00000496071 SEC23AQ15436 765 aa19.95■□□□□ 0.78
COMMD3-214ENST00000496071 CYB5R4Q7L1T6 521 aa19.95■□□□□ 0.78
COMMD3-214ENST00000496071 SMCHD1A6NHR9 2005 aa19.94■□□□□ 0.78
COMMD3-214ENST00000496071 H0YGN5 161 aa19.94■□□□□ 0.78
COMMD3-214ENST00000496071 ZNF865P0CJ78 1059 aaPredicted RBP19.94■□□□□ 0.78
COMMD3-214ENST00000496071 GOLGA8HP0CJ92 632 aa19.94■□□□□ 0.78
COMMD3-214ENST00000496071 AKR1A1P14550 325 aa19.94■□□□□ 0.78
COMMD3-214ENST00000496071 SART3Q15020 963 aaKnown RBP19.94■□□□□ 0.78
COMMD3-214ENST00000496071 CASC1Q6TDU7 716 aa19.94■□□□□ 0.78
COMMD3-214ENST00000496071 FAM133AQ8N9E0 248 aa19.94■□□□□ 0.78
COMMD3-214ENST00000496071 WDR19Q8NEZ3 1342 aa19.94■□□□□ 0.78
COMMD3-214ENST00000496071 SNAI1O95863 264 aaPredicted RBP19.93■□□□□ 0.78
COMMD3-214ENST00000496071 PARP1P09874 1014 aaKnown RBP19.93■□□□□ 0.78
COMMD3-214ENST00000496071 RARBP10826 455 aa19.93■□□□□ 0.78
COMMD3-214ENST00000496071 MUM1L1Q5H9M0 696 aa19.93■□□□□ 0.78
COMMD3-214ENST00000496071 LSG1Q9H089 658 aaKnown RBP19.93■□□□□ 0.78
COMMD3-214ENST00000496071 ABHD16BQ9H3Z7 469 aa19.93■□□□□ 0.78
COMMD3-214ENST00000496071 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.93■□□□□ 0.78
COMMD3-214ENST00000496071 CYP39A1Q9NYL5 469 aa19.93■□□□□ 0.78
COMMD3-214ENST00000496071 FAM184BQ9ULE4 1060 aa19.93■□□□□ 0.78
COMMD3-214ENST00000496071 ALPK3Q96L96 1907 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 ASB14A6NK59 587 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 KBTBD13C9JR72 458 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 IFIT3O14879 490 aaKnown RBP19.92■□□□□ 0.78
COMMD3-214ENST00000496071 TAL1P17542 331 aaPredicted RBP19.92■□□□□ 0.78
COMMD3-214ENST00000496071 CNTN2Q02246 1040 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 ANO1Q5XXA6 986 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 SKAP1Q86WV1 359 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 FGD4Q96M96 766 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 UBA5Q9GZZ9 404 aa19.92■□□□□ 0.78
COMMD3-214ENST00000496071 ACVR2BQ13705 512 aa19.91■□□□□ 0.78
COMMD3-214ENST00000496071 GJC2Q5T442 439 aaPredicted RBP19.91■□□□□ 0.78
COMMD3-214ENST00000496071 ARMCX2Q7L311 632 aa19.91■□□□□ 0.78
COMMD3-214ENST00000496071 MTA3Q9BTC8 594 aa19.91■□□□□ 0.78
COMMD3-214ENST00000496071 SENP6Q9GZR1 1112 aaPredicted RBP19.91■□□□□ 0.78
COMMD3-214ENST00000496071 ANO2Q9NQ90 1003 aa19.91■□□□□ 0.78
COMMD3-214ENST00000496071 XPNPEP3Q9NQH7 507 aa19.91■□□□□ 0.78
COMMD3-214ENST00000496071 SOWAHBA6NEL2 793 aa19.9■□□□□ 0.78
COMMD3-214ENST00000496071 CDC45O75419 566 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms