RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
HDAC9-226ENST00000496026 IL27Q8NEV9 243 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 MOV10L1Q9BXT6 1211 aaKnown RBP17.13■□□□□ 0.33
HDAC9-226ENST00000496026 TEX13BQ9BXU2 312 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 JMJD4Q9H9V9 463 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 ZNF214Q9UL59 606 aaPredicted RBP17.13■□□□□ 0.33
HDAC9-226ENST00000496026 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
HDAC9-226ENST00000496026 SLC25A27O95847 323 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 CDC27P30260 824 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 MAPK4P31152 587 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
HDAC9-226ENST00000496026 PSMC4P43686 418 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 ARHGEF6Q15052 776 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 RIOX2Q8IUF8 465 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 PIBF1Q8WXW3 757 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
HDAC9-226ENST00000496026 AGBL1Q96MI9 1066 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 PORCNQ9H237 461 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 SLKQ9H2G2 1235 aaPredicted RBP17.12■□□□□ 0.33
HDAC9-226ENST00000496026 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 EFCC1Q9HA90 598 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 PNMA2Q9UL42 364 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 CCPG1Q9ULG6 757 aa17.12■□□□□ 0.33
HDAC9-226ENST00000496026 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
HDAC9-226ENST00000496026 CYTH3O43739 400 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 ICAM1P05362 532 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 SMARCA1P28370 1054 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 COPB2P35606 906 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 PIGSQ96S52 555 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 ARHGAP39Q9C0H5 1083 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 MROH8Q9H579 483 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 NCOA5Q9HCD5 579 aaKnown RBP17.11■□□□□ 0.33
HDAC9-226ENST00000496026 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 FAM217BQ9NTX9 383 aaPredicted RBP17.11■□□□□ 0.33
HDAC9-226ENST00000496026 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
HDAC9-226ENST00000496026 ZNF536O15090 1300 aa17.11■□□□□ 0.33
HDAC9-226ENST00000496026 RLFQ13129 1914 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 CPLX1O14810 134 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 ZBTB5O15062 677 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 ALAS1P13196 640 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 ERCC3P19447 782 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 SLC35G1Q2M3R5 365 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 USH1GQ495M9 461 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 FBXO11Q86XK2 927 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 SHCBP1Q8NEM2 672 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 COA7Q96BR5 231 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 TRIM47Q96LD4 638 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 LIMCH1Q9UPQ0 1083 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 RIPK3Q9Y572 518 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 IVNS1ABPQ9Y6Y0 642 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 NID2Q14112 1375 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
HDAC9-226ENST00000496026 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
HDAC9-226ENST00000496026 PFKFB2O60825 505 aa17.09■□□□□ 0.33
HDAC9-226ENST00000496026 TKFCQ3LXA3 575 aa17.09■□□□□ 0.33
HDAC9-226ENST00000496026 CPLX2Q6PUV4 134 aaKnown RBP17.09■□□□□ 0.33
HDAC9-226ENST00000496026 PLEKHH3Q7Z736 793 aa17.09■□□□□ 0.33
HDAC9-226ENST00000496026 MTMR8Q96EF0 704 aa17.09■□□□□ 0.33
HDAC9-226ENST00000496026 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
HDAC9-226ENST00000496026 PARP14Q460N5 1801 aa17.08■□□□□ 0.33
HDAC9-226ENST00000496026 CNTNAP5Q8WYK1 1306 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 GNRH1P01148 92 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 TAL1P17542 331 aaPredicted RBP17.08■□□□□ 0.32
HDAC9-226ENST00000496026 HOXD10P28358 340 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 CTGFP29279 349 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 SCRN1Q12765 414 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 TRAF1Q13077 416 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 ME3Q16798 604 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 CHST13Q8NET6 341 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 ZSCAN31Q96LW9 406 aaPredicted RBP17.08■□□□□ 0.32
HDAC9-226ENST00000496026 AMNQ9BXJ7 453 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 PRDM10Q9NQV6 1147 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 RNF146Q9NTX7 359 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 FBXO40Q9UH90 709 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 TRIM17Q9Y577 477 aa17.08■□□□□ 0.32
HDAC9-226ENST00000496026 hCG_1642624A0A1W2PR95 340 aa17.07■□□□□ 0.32
HDAC9-226ENST00000496026 LARGE1O95461 756 aa17.07■□□□□ 0.32
HDAC9-226ENST00000496026 FCER1AP12319 257 aa17.07■□□□□ 0.32
HDAC9-226ENST00000496026 AKAP17AQ02040 695 aaKnown RBP17.07■□□□□ 0.32
HDAC9-226ENST00000496026 MMP19Q99542 508 aa17.07■□□□□ 0.32
HDAC9-226ENST00000496026 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
HDAC9-226ENST00000496026 PCDHA1Q9Y5I3 950 aa17.07■□□□□ 0.32
HDAC9-226ENST00000496026 V9GY48 417 aaPredicted RBP17.07■□□□□ 0.32
HDAC9-226ENST00000496026 ABCB11O95342 1321 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 STRNO43815 780 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 PPP1R11O60927 126 aaPredicted RBP17.06■□□□□ 0.32
HDAC9-226ENST00000496026 PPFIA3O75145 1194 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 CDKL5O76039 1030 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 IFNAR1P17181 557 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 PTPREP23469 700 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 MCM2P49736 904 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 CAP1Q01518 475 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 SSRP1Q08945 709 aaKnown RBP17.06■□□□□ 0.32
HDAC9-226ENST00000496026 FUT2Q10981 343 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms