RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 Q6ZNB5 142 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 Q7L0L9 218 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 RPUSD2Q8IZ73 545 aaKnown RBP5.57□□□□□ -1.52
VPS52-222ENST00000495981 TTC5Q8N0Z6 440 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 MICAL1Q8TDZ2 1067 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 FMNL2Q96PY5 1086 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 TRIM55Q9BYV6 548 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 IFT57Q9NWB7 429 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 TLR7Q9NYK1 1049 aaKnown RBP5.57□□□□□ -1.52
VPS52-222ENST00000495981 SCAF8Q9UPN6 1271 aaKnown RBP5.57□□□□□ -1.52
VPS52-222ENST00000495981 LAMA2P24043 3122 aaKnown RBP5.57□□□□□ -1.52
VPS52-222ENST00000495981 UBN2Q6ZU65 1347 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 PSME4Q14997 1843 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 WTIPA6NIX2 430 aaPredicted RBP5.56□□□□□ -1.52
VPS52-222ENST00000495981 FIGNL2A6NMB9 653 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 FAM177BA6PVY3 158 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 YDJCA8MPS7 323 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 U2SURPO15042 1029 aaKnown RBP5.56□□□□□ -1.52
VPS52-222ENST00000495981 MARCH6O60337 910 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 MAP3K6O95382 1288 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 NFKB1P19838 968 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 GIPRP48546 466 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 RPS26P62854 115 aaKnown RBP5.56□□□□□ -1.52
VPS52-222ENST00000495981 TEFQ10587 303 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 CRY2Q49AN0 593 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 TBC1D10BQ4KMP7 808 aaPredicted RBP5.56□□□□□ -1.52
VPS52-222ENST00000495981 OTOP1Q7RTM1 612 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 KRT26Q7Z3Y9 468 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 TRIM46Q7Z4K8 759 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 TRIM42Q8IWZ5 723 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 SH3TC2Q8TF17 1288 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 NKD1Q969G9 470 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 NXPE3Q969Y0 559 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 CEP44Q9C0F1 390 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 CCDC113Q9H0I3 377 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 ZNF576Q9H609 170 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 PCDH12Q9NPG4 1184 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 PRDM6Q9NQX0 595 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 CNOT7Q9UIV1 285 aaKnown RBP5.56□□□□□ -1.52
VPS52-222ENST00000495981 DNMT3LQ9UJW3 386 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 NOP58Q9Y2X3 529 aaKnown RBP5.56□□□□□ -1.52
VPS52-222ENST00000495981 PCDHB5Q9Y5E4 795 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 COL4A3BPQ9Y5P4 624 aa5.56□□□□□ -1.52
VPS52-222ENST00000495981 hCG_2014768A0A024R1R8 64 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 BTBD11A6QL63 1104 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 TLR3O15455 904 aaKnown RBP5.55□□□□□ -1.52
VPS52-222ENST00000495981 BMP1P13497 986 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 IGBP1P78318 339 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 ST5P78524 1137 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 TNP2Q05952 138 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 PKDCCQ504Y2 493 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 SEZ6Q53EL9 994 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 MCM10Q7L590 875 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 NBPF5PQ86XG9 351 aaPredicted RBP5.55□□□□□ -1.52
VPS52-222ENST00000495981 NCAPG2Q86XI2 1143 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 C2orf69Q8N8R5 385 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 CPLX3Q8WVH0 158 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 DNAJC7Q99615 494 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 SLC30A3Q99726 388 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 NDFIP2Q9NV92 336 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 KLHL42Q9P2K6 505 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 TRIM17Q9Y577 477 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 USP16Q9Y5T5 823 aa5.55□□□□□ -1.52
VPS52-222ENST00000495981 ERBB4Q15303 1308 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 TAF1P21675 1872 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 A0A096LPE4 126 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 A0A1W2PPZ6 126 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 DCDC2BA2VCK2 349 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 FAM187AA6NFU0 413 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 UBE2Q2LH0YL09 131 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 ATXN7O15265 892 aaPredicted RBP5.54□□□□□ -1.52
VPS52-222ENST00000495981 PPIP5K2O43314 1243 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 FKTNO75072 461 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 DGAT1O75907 488 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 BMP6P22004 513 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 PPP2R1AP30153 589 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 TM4SF4P48230 202 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 HYAL2Q12891 473 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 SQSTM1Q13501 440 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 DCTN1Q14203 1278 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 DDR2Q16832 855 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 RPS26P11Q5JNZ5 115 aaPredicted RBP5.54□□□□□ -1.52
VPS52-222ENST00000495981 PRAMEF18Q5VWM3 479 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 CLEC4GQ6UXB4 293 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 ADAMTSL4Q6UY14 1074 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 FILIP1Q7Z7B0 1213 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 KIAA0907Q7Z7F0 614 aaPredicted RBP5.54□□□□□ -1.52
VPS52-222ENST00000495981 CCDC84Q86UT8 332 aaPredicted RBP5.54□□□□□ -1.52
VPS52-222ENST00000495981 NIM1KQ8IY84 436 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 TMEM102Q8N9M5 508 aaPredicted RBP5.54□□□□□ -1.52
VPS52-222ENST00000495981 GATAD2BQ8WXI9 593 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 TEX13AQ9BXU3 409 aaPredicted RBP5.54□□□□□ -1.52
VPS52-222ENST00000495981 TNKS2Q9H2K2 1166 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 FANCLQ9NW38 375 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 ZNRF3Q9ULT6 936 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 PTPN22Q9Y2R2 807 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.54□□□□□ -1.52
VPS52-222ENST00000495981 A0A1B0GUL6 1792 aa5.54□□□□□ -1.52
VPS52-222ENST00000495981 LAMB1P07942 1786 aa5.53□□□□□ -1.52
VPS52-222ENST00000495981 ESYT3A0FGR9 886 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms