RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 RNF146Q9NTX7 359 aa21.79■■□□□ 1.08
CLCNKA-207ENST00000495784 MTMR7Q9Y216 660 aa21.79■■□□□ 1.08
CLCNKA-207ENST00000495784 SYNRGQ9UMZ2 1314 aa21.79■■□□□ 1.08
CLCNKA-207ENST00000495784 A0A0D9SFI3 127 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 TRIM6-TRIM34B2RNG4 842 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 ORC4O43929 436 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 RCSD1Q6JBY9 416 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 TICAM2Q86XR7 235 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 BADQ92934 168 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 AGBL1Q96MI9 1066 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 TSEN34Q9BSV6 310 aaKnown RBP21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 ABHD16BQ9H3Z7 469 aa21.78■■□□□ 1.08
CLCNKA-207ENST00000495784 POTEB2H3BUK9 544 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 PLA2G6O60733 806 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 DUSP11O75319 330 aaKnown RBP21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 ACLYP53396 1101 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 CCDC96Q2M329 555 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 TKFCQ3LXA3 575 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 RRP12Q5JTH9 1297 aaKnown RBP21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 CCDC174Q6PII3 467 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 ARMCX2Q7L311 632 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 SH3RF1Q7Z6J0 888 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 NUP133Q8WUM0 1156 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 FGD4Q96M96 766 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 RWDD1Q9H446 243 aaPredicted RBP21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 SPC25Q9HBM1 224 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 TACC3Q9Y6A5 838 aa21.77■■□□□ 1.08
CLCNKA-207ENST00000495784 MOXD2PA6NHM9 499 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 PQBP1O60828 265 aaKnown RBP21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 FGAP02671 866 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 CLTBP09497 229 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 ALAS1P13196 640 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 CCDC144BQ3MJ40 725 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 B4GALNT3Q6L9W6 998 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 RILPL2Q969X0 211 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 TRERF1Q96PN7 1200 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 A1CFQ9NQ94 594 aaKnown RBP21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 STARD7Q9NQZ5 370 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 PRR12Q9ULL5 1215 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 ZNF536O15090 1300 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 LTBP2Q14767 1821 aa21.76■■□□□ 1.07
CLCNKA-207ENST00000495784 TRIM43BA6NCK2 446 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 FGRP09769 529 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 C6orf222P0C671 652 aaPredicted RBP21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 HSPD1P10809 573 aaKnown RBP21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 SNAP25P60880 206 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 CNTN2Q02246 1040 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 NMIQ13287 307 aaPredicted RBP21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 RASGRP2Q7LDG7 609 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 CCDC144CPQ8IYA2 1237 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 FAM133AQ8N9E0 248 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 KLHDC9Q8NEP7 349 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 DCAF4Q8WV16 495 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 TRIM43Q96BQ3 446 aaPredicted RBP21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 MTMR10Q9NXD2 777 aa21.75■■□□□ 1.07
CLCNKA-207ENST00000495784 NOVP48745 357 aa21.74■■□□□ 1.07
CLCNKA-207ENST00000495784 SHHQ15465 462 aa21.74■■□□□ 1.07
CLCNKA-207ENST00000495784 KCNA10Q16322 511 aa21.74■■□□□ 1.07
CLCNKA-207ENST00000495784 ZNF589Q86UQ0 364 aaPredicted RBP21.74■■□□□ 1.07
CLCNKA-207ENST00000495784 SMC5Q8IY18 1101 aa21.74■■□□□ 1.07
CLCNKA-207ENST00000495784 SLC17A8Q8NDX2 589 aa21.74■■□□□ 1.07
CLCNKA-207ENST00000495784 CCDC171Q6TFL3 1326 aa21.74■■□□□ 1.07
CLCNKA-207ENST00000495784 MYADML2A6NDP7 307 aa21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 TOP1P11387 765 aaKnown RBP21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 HAND2P61296 217 aa21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 PCSK9Q8NBP7 692 aaKnown RBP21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 GLT1D1Q96MS3 346 aa21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 TMEM39AQ9NV64 488 aa21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 CCPG1Q9ULG6 757 aa21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 ZMYM6O95789 1325 aa21.73■■□□□ 1.07
CLCNKA-207ENST00000495784 ASB14A6NK59 587 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 DCDC2CA8MYV0 355 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 KIAA0355O15063 1070 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 ADCY6O43306 1168 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 RAG1P15918 1043 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 CST5P28325 142 aaPredicted RBP21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 MFAP1P55081 439 aaKnown RBP21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 C9orf50Q5SZB4 431 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 CCSAPQ6IQ19 270 aaPredicted RBP21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 NOL8Q76FK4 1167 aaKnown RBP21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 ANKRD33Q7Z3H0 272 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 CHD1LQ86WJ1 897 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 VTI1AQ96AJ9 217 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 STXBP5LQ9Y2K9 1186 aa21.72■■□□□ 1.07
CLCNKA-207ENST00000495784 SOWAHBA6NEL2 793 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 GJA9P57773 515 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 GNASQ5JWF2 1037 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 MFSD6Q6ZSS7 791 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 TOX2Q96NM4 488 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 TMEM47Q9BQJ4 181 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 KATNBL1Q9H079 304 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 UPF3AQ9H1J1 476 aaKnown RBP21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 TCP11L1Q9NUJ3 509 aa21.71■■□□□ 1.07
CLCNKA-207ENST00000495784 ICAM1P05362 532 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 ASGR1P07306 291 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 PCP11498 1178 aaKnown RBP21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 ITGB8P26012 769 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 SLC16A2P36021 539 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 IRX5P78411 483 aaPredicted RBP21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 TNFAIP2Q03169 654 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms